RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PTGESO14684 152 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 RAD51BO15315 384 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 SYNCRIPO60506 623 aaKnown RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 RASSF9O75901 435 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CES1P23141 567 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 CDH4P55283 916 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 DSG1Q02413 1049 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 NR6A1Q15406 480 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HIST2H2ACQ16777 129 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-202ENST00000338368 TSTD2Q5T7W7 516 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 HIST2H2AA3Q6FI13 130 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 NRBF2Q96F24 287 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 PANX3Q96QZ0 392 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 ACSS2Q9NR19 701 aa6.34□□□□□ -1.39
PRKDC-202ENST00000338368 MYADML2A6NDP7 307 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM247A6NEH6 219 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 SPATA31D3P0C874 917 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 SLC10A2Q12908 348 aaPredicted RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 RIPK1Q13546 671 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 TRIP4Q15650 581 aaPredicted RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 ARL13AQ5H913 290 aaPredicted RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 SPATA31D4Q6ZUB0 917 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 SAPCD2Q86UD0 394 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 IGDCC3Q8IVU1 814 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 FAM9CQ8IZT9 166 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM199Q8N511 208 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF557Q8N988 423 aaPredicted RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 PRPF18Q99633 342 aaKnown RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 MRPL57Q9BQC6 102 aaKnown RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 WARS2Q9UGM6 360 aaKnown RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 HBS1LQ9Y450 684 aaKnown RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 TUBGCP6Q96RT7 1819 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 ATXN2Q99700 1313 aaKnown RBP6.34□□□□□ -1.4
PRKDC-202ENST00000338368 KANSL1LA0AUZ9 987 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 ZBTB42B2RXF5 422 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 RAB6CQ53S08 254 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 TRPC4APQ8TEL6 797 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 ZCWPW1Q9H0M4 648 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 RAB6CQ9H0N0 254 aa6.34□□□□□ -1.4
PRKDC-202ENST00000338368 MBLAC1A4D2B0 266 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PEX11AO75192 247 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 DGKAP23743 735 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CACHD1Q5VU97 1274 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 RIPOR1Q6ZS17 1223 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FSTL5Q8N475 847 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PRRC2BQ5JSZ5 2229 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 A0A1B0GVM2 712 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 TCAF2A6NFQ2 919 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KRT6AP02538 564 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KRT6BP04259 564 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KRT6CP48668 564 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 POLR2LP62875 67 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 VWA5B1Q5TIE3 1220 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 METTL21CQ5VZV1 264 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 HJURPQ8NCD3 748 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MARK4Q96L34 752 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 DPY30Q9C005 99 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MAGEH1Q9H213 219 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 LRMDAQ9H2I8 198 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 COG4Q9H9E3 785 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CLIC5Q9NZA1 410 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 C1RP00736 705 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SLC2A4P14672 509 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PRKD1Q15139 912 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 AASDHQ4L235 1098 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ARL14EPQ8N8R7 260 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 RBM15BQ8NDT2 890 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PTCD2Q8WV60 388 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM159Q96B96 161 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PTPN18Q99952 460 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 TRMOQ9BU70 441 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM126AQ9BYI3 521 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ASPSCR1Q9BZE9 553 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 OSBPL2Q9H1P3 480 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CXorf56Q9H5V9 222 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 EVLQ9UI08 416 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MYO18AQ92614 2054 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CDK5RAP2Q96SN8 1893 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FAM159BA6NKW6 160 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 EVPLLA8MZ36 301 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 LBPP18428 481 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PRKCHP24723 683 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PKNOX1P55347 436 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PLA2G4CQ9UP65 541 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 NR5A2O00482 541 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SERPIND1P05546 499 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SNRPD1P62314 119 aaKnown RBP6.33□□□□□ -1.4
PRKDC-202ENST00000338368 KLF10Q13118 480 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 IYDQ6PHW0 289 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF280BQ86YH2 543 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CLYBLQ8N0X4 340 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 UCMAQ8WVF2 138 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 ELOVL6Q9H5J4 265 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 MFHAS1Q9Y4C4 1052 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 SEC22BO75396 215 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FKBP9O95302 570 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 PPM1AP35813 382 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 CYP2R1Q6VVX0 501 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 USP45Q70EL2 814 aa6.33□□□□□ -1.4
PRKDC-202ENST00000338368 FKBP9P1Q75LS8 142 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms