RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 UMODL1-AS1Q8N2C9 162 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 UBL7Q96S82 380 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 SUV39H2Q9H5I1 410 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 GPR27Q9NS67 375 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 APOBEC3BQ9UH17 382 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 ARID1BQ8NFD5 2236 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 ACACAQ13085 2346 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 SHROOM3Q8TF72 1996 aa10.77□□□□□ -0.68
CAPN3-202ENST00000337571 ARHGAP42A6NI28 874 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 SMTNL1A8MU46 457 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 WASH4PA8MWX3 477 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 EIF3CLB5ME19 914 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 SPINT1O43278 529 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 LZTS3O60299 673 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 PALMO75781 387 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 MBD3O95983 291 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 MPOP05164 745 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 PSMA2P25787 234 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 RBMS1P29558 406 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 LSSP48449 732 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 PEX5P50542 639 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 POLR2LP62875 67 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 GABREP78334 506 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 EIF2B5Q13144 721 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 MMRN1Q13201 1228 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 C1orf61Q13536 156 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 LRRC14Q15048 493 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 ELOCQ15369 112 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 CYTH1Q15438 398 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 UGP2Q16851 508 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 CCDC183Q5T5S1 534 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 ERMARDQ5T6L9 678 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 BROXQ5VW32 411 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 CDCP2Q5VXM1 449 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 PHACTR4Q8IZ21 702 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 NETO2Q8NC67 525 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 ATL2Q8NHH9 583 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 GRAMD1AQ96CP6 724 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 EXOC2Q96KP1 924 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 ZNF641Q96N77 438 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 LGMNQ99538 433 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 EIF3CQ99613 913 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 KLC2Q9H0B6 622 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 DHX35Q9H5Z1 703 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 NOL6Q9H6R4 1146 aaKnown RBP10.77□□□□□ -0.69
CAPN3-202ENST00000337571 KLF15Q9UIH9 416 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 MYO6Q9UM54 1294 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 NEU3Q9UQ49 428 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 PCDHB1Q9Y5F3 818 aa10.77□□□□□ -0.69
CAPN3-202ENST00000337571 CACNA1GO43497 2377 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ZFYVE26Q68DK2 2539 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 TCRBV5S1A1TA0A578 114 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 EME2A4GXA9 379 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-202ENST00000337571 LMO7DNF2Z398 122 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 EEF2KO00418 725 aaKnown RBP10.76□□□□□ -0.69
CAPN3-202ENST00000337571 MUSKO15146 869 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 YY2O15391 372 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 INSIG1O15503 277 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 PRPSAP2O60256 369 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ALPIP09923 528 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ITIH2P19823 946 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 SERPINA4P29622 427 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 PAPOLAP51003 745 aaKnown RBP10.76□□□□□ -0.69
CAPN3-202ENST00000337571 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
CAPN3-202ENST00000337571 MAMLD1Q13495 774 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ASIC2Q16515 512 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ISXQ2M1V0 245 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 TMEM52BQ4KMG9 183 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 BRAT1Q6PJG6 821 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ENPP7Q6UWV6 458 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 MACC1Q6ZN28 852 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 GPR155Q7Z3F1 870 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 RD3Q7Z3Z2 195 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 IRF2BP2Q7Z5L9 587 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 HID1Q8IV36 788 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 RBFAQ8N0V3 343 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 AOPEPQ8N6M6 819 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 WDR48Q8TAF3 677 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 NAT6Q93015 286 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 CRELD1Q96HD1 420 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 TBATAQ96M53 351 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 FCRL3Q96P31 734 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-202ENST00000337571 TUBGCP5Q96RT8 1024 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 ATP13A3Q9H7F0 1226 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 CAAP1Q9H8G2 361 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 POLR1BQ9H9Y6 1135 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 MBNL1Q9NR56 388 aaKnown RBP10.76□□□□□ -0.69
CAPN3-202ENST00000337571 GULP1Q9UBP9 304 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 PCSK1NQ9UHG2 260 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 AP4E1Q9UPM8 1137 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 IGSF10Q6WRI0 2623 aa10.76□□□□□ -0.69
CAPN3-202ENST00000337571 J3KR12 359 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 DFFAO00273 331 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 PRAMEF11O60813 436 aa10.75□□□□□ -0.69
CAPN3-202ENST00000337571 GCATO75600 419 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms