RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 STX7O15400 261 aaKnown RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 MAN1A2O60476 641 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 CNMDO75829 334 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 GLP2RO95838 553 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 EFNA1P20827 205 aaPredicted RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 CDH5P33151 784 aaPredicted RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 LIMK2P53671 638 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 GEMP55040 296 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 CCL23P55773 120 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 ESRRGP62508 458 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 PTPRRQ15256 657 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 TNFAIP8L3Q5GJ75 292 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 C14orf80Q86SX3 495 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 LINC00523Q86TU6 105 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 MAGEE2Q8TD90 523 aaPredicted RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 MAGEC3Q8TD91 643 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 PPP2R3CQ969Q6 453 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 RNF145Q96MT1 663 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 SOX17Q9H6I2 414 aaPredicted RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 MARCH2Q9P0N8 246 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 ADAMTS6Q9UKP5 1117 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 A0A1B0GVG6 124 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 TCRBV5S1A1TA0A578 114 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 RGSL1A5PLK6 1076 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 PTGES3LE9PB15 166 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 GPR39O43194 453 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 ZNF189O75820 626 aaPredicted RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 HGFP14210 728 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 PSME3P61289 254 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 POU4F1Q01851 419 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 NFYCQ13952 458 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 CYP51A1Q16850 503 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 AP5B1Q2VPB7 878 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 MBLAC2Q68D91 279 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 RBM44Q6ZP01 1051 aaKnown RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 SPPL2CQ8IUH8 684 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 DENND1CQ8IV53 801 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 CEP97Q8IW35 865 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 LRTOMTQ8WZ04 291 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 MTMR10Q9NXD2 777 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
HPS4-201ENST00000336873 PKP3Q9Y446 797 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 IGKV6-21A0A0C4DH24 114 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 HMX2A2RU54 273 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 MYO1GB0I1T2 1018 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 E7ESA3 106 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 UBXN8O00124 270 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 GPR182O15218 404 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 DLX3O60479 287 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 RNASEH1O60930 286 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 FKBP6O75344 327 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ITGAXP20702 1163 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 EDNRBP24530 442 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 CNTFP26441 200 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PTPN9P43378 593 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 FLT3LGP49771 235 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ACTR3P61158 418 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 TAF10Q12962 218 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 TRIM32Q13049 653 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 GK3PQ14409 553 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PCID2Q5JVF3 399 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 LIPMQ5VYY2 423 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 CES4AQ5XG92 561 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PTRHD1Q6GMV3 140 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 TTC33Q6PID6 262 aaPredicted RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 NET1Q7Z628 596 aaPredicted RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 FBXW8Q8N3Y1 598 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 FNDC5Q8NAU1 212 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ZNF398Q8TD17 642 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 RERGLQ9H628 205 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 GKN1Q9NS71 199 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 GMIPQ9P107 970 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 CORO1CQ9ULV4 474 aaPredicted RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 COL24A1Q17RW2 1714 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 DYTNA2CJ06 578 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ZBTB11O95625 1053 aaPredicted RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 HLA-DQB2P05538 268 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ATP6V1B2P21281 511 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PRKCHP24723 683 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 HMOX2P30519 316 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 YAP1P46937 504 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 SERPINH1P50454 418 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 PHEXP78562 749 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 GTF2H3Q13889 308 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PTPRNQ16849 979 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 TIGD2Q4W5G0 525 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 MARCH8Q5T0T0 291 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 MFSD14CQ5VZR4 134 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ARCQ7LC44 396 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 C11orf74Q86VG3 221 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 HMCESQ96FZ2 354 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 HAUS8Q9BT25 410 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ALG2Q9H553 416 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 EML4Q9HC35 981 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 OLA1Q9NTK5 396 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms