RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 ZNF670Q9BS34 389 aa11.46□□□□□ -0.57
MRPL55-203ENST00000336520 PCDH12Q9NPG4 1184 aa11.46□□□□□ -0.57
MRPL55-203ENST00000336520 HS3ST3A1Q9Y663 406 aa11.46□□□□□ -0.57
MRPL55-203ENST00000336520 MAP1BP46821 2468 aaKnown RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 POM121BA6NF01 834 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 MUSKO15146 869 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 MFSD11O43934 449 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 MAFKO60675 156 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 LDOC1O95751 146 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 IL4RP24394 825 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 MMP13P45452 471 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 RABIFP47224 123 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 ARSEP51690 589 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 NSUN2Q08J23 767 aaKnown RBP eCLIP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 BNIP3Q12983 259 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 ANKRD20A8PQ5CZ79 823 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 MARC1Q5VT66 337 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 RAB44Q7Z6P3 723 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 SLCO6A1Q86UG4 719 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 DCP2Q8IU60 420 aaKnown RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 LRRC49Q8IUZ0 686 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 FAM71BQ8TC56 605 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 ADAMTS14Q8WXS8 1223 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 RFFLQ8WZ73 363 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 CNDP2Q96KP4 475 aaKnown RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 BMFQ96LC9 184 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 LENG8Q96PV6 779 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-203ENST00000336520 RBSNQ9H1K0 784 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 DNAJC28Q9NX36 388 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 KLK13Q9UKR3 277 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 WASF3Q9UPY6 502 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 ATP8A1Q9Y2Q0 1164 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 NEUROG3Q9Y4Z2 214 aa11.45□□□□□ -0.58
MRPL55-203ENST00000336520 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 LRRD1A4D1F6 860 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ENC1O14682 589 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 LZTS3O60299 673 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 NEBLO76041 1014 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 MTA2O94776 668 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 PRKCGP05129 697 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 TNNT1P13805 278 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 MMP12P39900 470 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ARHGAP25P42331 645 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ZNF75DP51815 510 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 THOP1P52888 689 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 POLR2LP62875 67 aaKnown RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 SEMG2Q02383 582 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 PDE1CQ14123 709 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 PAFAH1B3Q15102 231 aaKnown RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 TMEM52BQ4KMG9 183 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 HS1BP3Q53T59 392 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ODF2Q5BJF6 829 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ZNF542PQ5EBM4 170 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 NCBP2-AS2Q69YL0 99 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 PARGQ86W56 976 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 SLC22A18ASQ8N1D0 253 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 TC2NQ8N9U0 490 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 PCDH19Q8TAB3 1148 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 PDCD6IPQ8WUM4 868 aaKnown RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 ZNF830Q96NB3 372 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 KLF6Q99612 283 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-203ENST00000336520 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 COQ6Q9Y2Z9 468 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 IGF2RP11717 2491 aa11.44□□□□□ -0.58
MRPL55-203ENST00000336520 SPTY2D1-AS1A0A0U1RR47 76 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 H3BM21 787 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
MRPL55-203ENST00000336520 FFAR2O15552 330 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 SPOPO43791 374 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 PEX11BO96011 259 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 KRT1P04264 644 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 C6P13671 934 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 IGFALSP35858 605 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 GARSP41250 739 aaKnown RBP11.43□□□□□ -0.58
MRPL55-203ENST00000336520 MAGEA1P43355 309 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 NOP2P46087 812 aaKnown RBP11.43□□□□□ -0.58
MRPL55-203ENST00000336520 LIG3P49916 1009 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 MAXP61244 160 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 HNRNPKP61978 463 aaKnown RBP eCLIP11.43□□□□□ -0.58
MRPL55-203ENST00000336520 ITKQ08881 620 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 GALNT2Q10471 571 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 FZD2Q14332 565 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 IRF4Q15306 451 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 SPA17Q15506 151 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 TIGD7Q6NT04 549 aaPredicted RBP11.43□□□□□ -0.58
MRPL55-203ENST00000336520 UNQ6494/PRO21346Q6UXR6 183 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 KDM7AQ6ZMT4 941 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 KANSL1Q7Z3B3 1105 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 PGBD5Q8N414 524 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.43□□□□□ -0.58
MRPL55-203ENST00000336520 RAPGEF5Q92565 580 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 CENPTQ96BT3 561 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 ECHDC3Q96DC8 303 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 IFT43Q96FT9 208 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 MRFAP1L1Q96HT8 127 aa11.43□□□□□ -0.58
MRPL55-203ENST00000336520 NUDCD1Q96RS6 583 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms