RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ZC3H11AO75152 810 aaKnown RBP eCLIP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TOM1L1O75674 476 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TOXO94900 526 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ENDOD1O94919 500 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 CLDN9O95484 217 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DUS4LO95620 317 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FYNP06241 537 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GAAP10253 952 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TFEBP19484 476 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GSTM2P28161 218 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ATP5DP30049 168 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 EFNA4P52798 201 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 MYL7Q01449 175 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ACY1Q03154 408 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 EGFEM1PQ0D2K5 195 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FZD2Q14332 565 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF169Q14929 603 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 HSPB2Q16082 182 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FAM47CQ5HY64 1035 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 PIP5KL1Q5T9C9 394 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF425Q6IV72 752 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SWSAP1Q6NVH7 229 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 KRBA2Q6ZNG9 492 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TAS1R1Q7RTX1 841 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 TDRPQ86YL5 185 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 LRRC56Q8IYG6 542 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 CLYBLQ8N0X4 340 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 BEST3Q8N1M1 668 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 XXYLT1Q8NBI6 393 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 HJURPQ8NCD3 748 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FBXO30Q8TB52 745 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 FAM57AQ8TBR7 257 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 GPKOWQ92917 476 aaPredicted RBP eCLIP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 RNASE6Q93091 150 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ALG14Q96F25 216 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 APOLD1Q96LR9 279 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 AK8Q96MA6 479 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZFP42Q96MM3 310 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SH3GL2Q99962 352 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DBNDD2Q9BQY9 259 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ALG1Q9BT22 464 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 RPP25Q9BUL9 199 aaKnown RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 NLNQ9BYT8 704 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZHX3Q9H4I2 956 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ANLNQ9NQW6 1124 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 C14orf105Q9NVL8 296 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ADAM22Q9P0K1 906 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 DNAJB4Q9UDY4 337 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF629Q9UEG4 869 aaPredicted RBP1.59□□□□□ -2.16
LINC00643-201ENST00000334389 AP1M2Q9Y6Q5 423 aa1.59□□□□□ -2.16
LINC00643-201ENST00000334389 SACSQ9NZJ4 4579 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SMIM28A0A1B0GU29 152 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ANKRD33BA6NCL7 494 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 A6NNC1 897 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 AREL1O15033 823 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SIGLEC6O43699 453 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SUSD5O60279 629 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF354AO60765 605 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PDE5AO76074 875 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 GLSO94925 669 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CPNE6O95741 557 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PRNPP04156 253 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CHGBP05060 677 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MYL1P05976 194 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 TACSTD2P09758 323 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF888P0CJ79 500 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CHMP24386 653 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 EPHB2P29323 1055 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PIP4K2AP48426 406 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CD151P48509 253 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 DHPSP49366 369 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 GZMKP49863 264 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 HNRNPH2P55795 449 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ERVFRD-1P60508 538 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 COG7P83436 770 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SP4Q02446 784 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CAPSQ13938 189 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PCSK7Q16549 785 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 BEAN1Q3B7T3 259 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 HS1BP3Q53T59 392 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 KCTD11Q693B1 232 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SLC6A19Q695T7 634 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RFX8Q6ZV50 586 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RD3Q7Z3Z2 195 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ADIPOR2Q86V24 386 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZDHHC17Q8IUH5 632 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 LRRC49Q8IUZ0 686 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 UNC45BQ8IWX7 931 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 HOMEZQ8IX15 550 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF683Q8IZ20 524 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CLASRPQ8N2M8 674 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RNF217Q8TC41 542 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MAPK15Q8TD08 544 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 USP7Q93009 1102 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ARHGEF26Q96DR7 871 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 VPS35Q96QK1 796 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 TRMOQ9BU70 441 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ANGPTL4Q9BY76 406 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CLPBQ9H078 707 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SEMA6CQ9H3T2 930 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms