RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PLXNA1Q9UIW2 1896 aa23.8■■□□□ 1.4
TSKU-201ENST00000333090 RECQL4O94761 1208 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 YBX3P16989 372 aaKnown RBP eCLIP23.79■■□□□ 1.44e-7■■■■□ 23.4
TSKU-201ENST00000333090 NPR3P17342 541 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 YWHAQP27348 245 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 TKTL1P51854 596 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 PCID2Q5JVF3 399 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 ANKFN1Q8N957 763 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 SMYD1Q8NB12 490 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 DUS3LQ96G46 650 aaKnown RBP23.79■■□□□ 1.4
TSKU-201ENST00000333090 SLC2A13Q96QE2 648 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 TCF12Q99081 682 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 FAM149AA5PLN7 773 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 HSPA8P11142 646 aaKnown RBP23.79■■□□□ 1.4
TSKU-201ENST00000333090 UGT1A6P19224 532 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 ATP6V1B2P21281 511 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 GALNT2Q10471 571 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 LINC00523Q86TU6 105 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 GPR180Q86V85 440 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 IPMKQ8NFU5 416 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 OR2T34Q8NGX1 318 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 OR2T3Q8NH03 318 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 PHF21BQ96EK2 531 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 VAT1Q99536 393 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 ZNF711Q9Y462 761 aa23.79■■□□□ 1.4
TSKU-201ENST00000333090 TMX2-CTNND1H3BSU7 103 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 TPST1O60507 370 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 ZNF189O75820 626 aaPredicted RBP23.78■■□□□ 1.4
TSKU-201ENST00000333090 FYNP06241 537 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 BMP2P12643 396 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 DNAJB1P25685 340 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 ARHGAP1Q07960 439 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 ZNF470Q6ECI4 717 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 PATL1Q86TB9 770 aaKnown RBP23.78■■□□□ 1.4
TSKU-201ENST00000333090 LRRC43Q8N309 656 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 FAR2Q96K12 515 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 BRD8Q9H0E9 1235 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 IL1RL2Q9HB29 575 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 FAIMQ9NVQ4 179 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 DDIT4Q9NX09 232 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 PAPPA2Q9BXP8 1791 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 ARNTP27540 789 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 MAP3K7CLP57077 242 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 DNAJB13P59910 316 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 ZBED5Q49AG3 693 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 SLC27A1Q6PCB7 646 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 CATSPER4Q7RTX7 472 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 ERMP1Q7Z2K6 904 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 CPNE9Q8IYJ1 553 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 MRGBPQ9NV56 204 aa23.78■■□□□ 1.4
TSKU-201ENST00000333090 UBQLN1Q9UMX0 589 aaKnown RBP23.78■■□□□ 1.4
TSKU-201ENST00000333090 YJEFN3A6XGL0 299 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 AURKAO14965 403 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 ETFBP38117 255 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 PPIL2Q13356 520 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 ANKDD1AQ495B1 522 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 KCTD21Q4G0X4 260 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 ELMSAN1Q6PJG2 1045 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 CTU1Q7Z7A3 348 aaKnown RBP23.77■■□□□ 1.4
TSKU-201ENST00000333090 OSTM1Q86WC4 334 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 CNTN4Q8IWV2 1026 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 SLC9A7Q96T83 725 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 EML4Q9HC35 981 aaKnown RBP23.77■■□□□ 1.4
TSKU-201ENST00000333090 FBRSL1Q9HCM7 1045 aaKnown RBP23.77■■□□□ 1.4
TSKU-201ENST00000333090 RBPJLQ9UBG7 517 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 BRCA1P38398 1863 aaKnown RBP23.77■■□□□ 1.4
TSKU-201ENST00000333090 AP3B1O00203 1094 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 PIRO00625 290 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 HUS1O60921 280 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 NCAM1P13591 858 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 KPNA2P52292 529 aaKnown RBP23.77■■□□□ 1.4
TSKU-201ENST00000333090 TBCELQ5QJ74 424 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 CLEC6AQ6EIG7 209 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 FAM45BPQ6NSW5 357 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 FAM45AQ8TCE6 357 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 NTAN1Q96AB6 310 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 HNRNPABQ99729 332 aaKnown RBP23.77■■□□□ 1.4
TSKU-201ENST00000333090 MED10Q9BTT4 135 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 ULBP1Q9BZM6 244 aa23.77■■□□□ 1.4
TSKU-201ENST00000333090 A8MT66 165 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 TSPAN8P19075 237 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 ARCN1P48444 511 aaKnown RBP23.76■■□□□ 1.39
TSKU-201ENST00000333090 CD151P48509 253 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 SLC5A3P53794 718 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 FAM83EQ2M2I3 478 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 CLEC20AQ6ZU45 233 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 KDELC2Q7Z4H8 507 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 TBL1YQ9BQ87 522 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 ZNHIT2Q9UHR6 403 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 FBXW11Q9UKB1 542 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 IPO13O94829 963 aaKnown RBP23.76■■□□□ 1.39
TSKU-201ENST00000333090 TFPTP0C1Z6 253 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 NME5P56597 212 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 RBM20Q5T481 1227 aaKnown RBP23.76■■□□□ 1.39
TSKU-201ENST00000333090 Q6ZNX1 250 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 LZTR1Q8N653 840 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 ADI1Q9BV57 179 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 IGSF5Q9NSI5 407 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 OR12D3Q9UGF7 316 aa23.76■■□□□ 1.39
TSKU-201ENST00000333090 ZSWIM8A7E2V4 1837 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms