RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TSGA13Q96PP4 275 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 IL12RB2Q99665 862 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 ACBD6Q9BR61 282 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 IL1RL2Q9HB29 575 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 CSNK1G1Q9HCP0 422 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 C6orf203Q9P0P8 240 aaPredicted RBP14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 GIT1Q9Y2X7 761 aa14.16□□□□□ -0.14
ATP2C1-201ENST00000328560 TCAF2A6NFQ2 919 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 TRPC5OSA6NMA1 111 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 FAM163BP0C2L3 166 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 PIRTP0C851 137 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 PRKAA2P54646 552 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 DSC2Q02487 901 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 NSUN2Q08J23 767 aaKnown RBP eCLIP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 KLC3Q6P597 504 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 LILRA2Q8N149 483 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 OR9I1Q8NGQ6 314 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 ATP6V1E2Q96A05 226 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 KLHL32Q96NJ5 620 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 ABCC13Q9NSE7 274 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 BCAP29Q9UHQ4 241 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 KCTD3Q9Y597 815 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 HS3ST4Q9Y661 456 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 AP4B1Q9Y6B7 739 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 SBF1O95248 1867 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 UBDO15205 165 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 RPL9P32969 192 aaKnown RBP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 KPNA2P52292 529 aaKnown RBP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 ZNF135P52742 658 aaPredicted RBP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 C1QTNF8P60827 252 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 PSME3P61289 254 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 SULT2A1Q06520 285 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 IRF5Q13568 498 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 FASTKQ14296 549 aaKnown RBP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 PTPRCAPQ14761 206 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 RBBP5Q15291 538 aaKnown RBP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 DDR2Q16832 855 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 OGFRL1Q5TC84 451 aaPredicted RBP14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 AGAP9Q5VTM2 703 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 AP1ARQ63HQ0 302 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 PIM3Q86V86 326 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 MIB1Q86YT6 1006 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 IRGQQ8WZA9 623 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 DPF3Q92784 378 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 HDAC10Q969S8 669 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 CCDC28BQ9BUN5 200 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 PADI3Q9ULW8 664 aa14.15□□□□□ -0.14
ATP2C1-201ENST00000328560 C9JVG2 144 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 DNAJA2O60884 412 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 DNAJB2P25686 324 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 YWHAQP27348 245 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 SLC10A7Q0GE19 358 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 SLC39A12Q504Y0 691 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 PITRM1Q5JRX3 1037 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 GPR158Q5T848 1215 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 CUZD1Q86UP6 607 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 C2CD4AQ8NCU7 369 aaPredicted RBP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 OR52K2Q8NGK3 314 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 ANKRD49Q8WVL7 239 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 ADAM2Q99965 735 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 SLC39A3Q9BRY0 314 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 Q9H521 79 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 SP110Q9HB58 689 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 RALGAPA2Q2PPJ7 1873 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 A8MT66 165 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 E7ENX8 843 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 MGEA5O60502 916 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 CRTAMO95727 393 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 GPR15P49685 360 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 ARPP19P56211 112 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 POU4F1Q01851 419 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 ADGRE1Q14246 886 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 RANBP10Q6VN20 620 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 TTC16Q8NEE8 873 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 EME1Q96AY2 570 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 FBRSL1Q9HCM7 1045 aaKnown RBP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 A0A087X1B8 175 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 PEX1O43933 1283 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 TBX18O95935 607 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 NELFEP18615 380 aaKnown RBP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 SERPINH1P50454 418 aaKnown RBP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 FBXO48Q5FWF7 155 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 SCD5Q86SK9 330 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 CIR1Q86X95 450 aaPredicted RBP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 MFN1Q8IWA4 741 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 LZTR1Q8N653 840 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 CPSF7Q8N684 471 aaKnown RBP14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 HMCESQ96FZ2 354 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 IGSF5Q9NSI5 407 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 UBAP1Q9NZ09 502 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 EPS15L1Q9UBC2 864 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 NEU3Q9UQ49 428 aa14.14□□□□□ -0.15
ATP2C1-201ENST00000328560 PSMD12O00232 456 aaPredicted RBP14.13□□□□□ -0.15
ATP2C1-201ENST00000328560 CASQ2O14958 399 aaPredicted RBP14.13□□□□□ -0.15
ATP2C1-201ENST00000328560 FGF10O15520 208 aaPredicted RBP14.13□□□□□ -0.15
ATP2C1-201ENST00000328560 CAPN15O75808 1086 aa14.13□□□□□ -0.15
ATP2C1-201ENST00000328560 CNTN5O94779 1100 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms