RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 PYROXD2Q8N2H3 581 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 LEMD2Q8NC56 503 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 RNF139Q8WU17 664 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 RAB2BQ8WUD1 216 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 SEPT1Q8WYJ6 367 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 CCDC126Q96EE4 140 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 ZNF641Q96N77 438 aaPredicted RBP11.36□□□□□ -0.59
GINS3-202ENST00000328514 PSD2Q9BQI7 771 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 SEZ6LQ9BYH1 1024 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 EML4Q9HC35 981 aaKnown RBP11.36□□□□□ -0.59
GINS3-202ENST00000328514 ACSS2Q9NR19 701 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 SETD4Q9NVD3 440 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 ATAD3AQ9NVI7 634 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.36□□□□□ -0.59
GINS3-202ENST00000328514 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 ZNF639Q9UID6 485 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 TRIM17Q9Y577 477 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 PHIPQ8WWQ0 1821 aa11.36□□□□□ -0.59
GINS3-202ENST00000328514 FNDC1Q4ZHG4 1894 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 SAC3D1A6NKF1 404 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 H0YAE9 185 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 INO80B-WBP1J3KQ70 363 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 DCLK1O15075 740 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 NCAM2O15394 837 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PHGDHO43175 533 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 MTSS1O43312 755 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 NOL3O60936 208 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 CLPXO76031 633 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 GPIP06744 558 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PSMA4P25789 261 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 ABCG1P45844 678 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 RXRGP48443 463 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TMED10P49755 219 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 BACE1P56817 501 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 POU5F1BQ06416 359 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TNK2Q07912 1038 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TMEM132DQ14C87 1099 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SLC10A6Q3KNW5 377 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SLC25A52Q3SY17 297 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CYBRD1Q53TN4 286 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CNSTQ6PJW8 725 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 ZNF773Q6PK81 442 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TMEM130Q8N3G9 435 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 MINDY1Q8N5J2 469 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SLC15A4Q8N697 577 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 DNAAF3Q8N9W5 541 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 MINDY2Q8NBR6 621 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TXNDC5Q8NBS9 432 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 TRPV3Q8NET8 790 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 NT5C3BQ969T7 300 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 C12orf42Q96LP6 360 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PGLYRP2Q96PD5 576 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 MROQ9BYG7 248 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CEP41Q9BYV8 373 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 OSBPL2Q9H1P3 480 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 GBA3Q9H227 469 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 MUC13Q9H3R2 512 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TBC1D13Q9NVG8 400 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PRMT7Q9NVM4 692 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 TRNAU1APQ9NX07 287 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 TRHDEQ9UKU6 1024 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PSME2Q9UL46 239 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CORINQ9Y5Q5 1042 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 GPC6Q9Y625 555 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 TRIP11Q15643 1979 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 A0A087X1B8 175 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 GOLGA8TH3BQL2 631 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 XPOTO43592 962 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 PGK1P00558 417 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 EIF2S1P05198 315 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 TGFB3P10600 412 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 MBL2P11226 248 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 MATKP42679 507 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 ACADSBP45954 432 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 GJA8P48165 433 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 GLRBP48167 497 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 ADARB1P78563 741 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 OLIG2Q13516 323 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SNX17Q15036 470 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 COQ5Q5HYK3 327 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 CERCAMQ5T4B2 595 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 EGFLAMQ63HQ2 1017 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 METTL7BQ6UX53 244 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 PDZD4Q76G19 769 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 CCDC80Q76M96 950 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 UNC93AQ86WB7 457 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 ADGRG5Q8IZF4 528 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 DHRSXQ8N5I4 330 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CCNYL1Q8N7R7 359 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CCNYQ8ND76 341 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 SLC16A10Q8TF71 515 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.35□□□□□ -0.59
GINS3-202ENST00000328514 EFHD2Q96C19 240 aaPredicted RBP11.35□□□□□ -0.59
GINS3-202ENST00000328514 ZNF347Q96SE7 839 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 CYP2S1Q96SQ9 504 aa11.35□□□□□ -0.59
GINS3-202ENST00000328514 MLPHQ9BV36 600 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms