RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IL10P22301 178 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TGM1P22735 817 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 GLUD2P49448 558 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 ATP6V0D1P61421 351 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 AQP6Q13520 282 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 INPP5AQ14642 412 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SPCS2Q15005 226 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 RETREG3Q86VR2 466 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SCUBE3Q8IX30 993 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 DDIASQ8IXT1 998 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 MINDY2Q8NBR6 621 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 FAM151AQ8WW52 585 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 HDAC10Q969S8 669 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 OMDQ99983 421 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 C11orf84Q9BUA3 381 aaPredicted RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 NIFKQ9BYG3 293 aaKnown RBP12.88□□□□□ -0.35
CCDC60-201ENST00000327554 LRRC4Q9HBW1 653 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 C8orf4Q9NR00 106 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SEPT10Q9P0V9 454 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 KLHL3Q9UH77 587 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 FIS1Q9Y3D6 152 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 RIPK3Q9Y572 518 aa12.88□□□□□ -0.35
CCDC60-201ENST00000327554 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 EIF2S1P05198 315 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 NFICP08651 508 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 ALOX5P09917 674 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 COL11A1P12107 1806 aaPredicted RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 HNRNPLP14866 589 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 PSMA4P25789 261 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 AXLP30530 894 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 HADHAP40939 763 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 SP2Q02086 613 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 USP10Q14694 798 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 SF3B4Q15427 424 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 INAQ16352 499 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 TXNDC5Q8NBS9 432 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 EHD1Q9H4M9 534 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 FAM49BQ9NUQ9 324 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 ABCD2Q9UBJ2 740 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 EGFL7Q9UHF1 273 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 SSC5DA1L4H1 1573 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 TTC24A2A3L6 582 aaPredicted RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 CCDC78A2IDD5 438 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 NDUFB5O43674 189 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 PGK1P00558 417 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 ITGB3P05106 788 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 PRKCBP05771 671 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 UGT2B4P06133 528 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 CXCL8P10145 99 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 NPR1P16066 1061 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 ELK4P28324 431 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 RPS9P46781 194 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 EFNA5P52803 228 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 NDST1P52848 882 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 IFRD2Q12894 506 aaPredicted RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 SLC12A1Q13621 1099 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 GOLGA7BQ2TAP0 167 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 PIWIL3Q7Z3Z3 882 aaKnown RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 SNX29P2Q8IUI4 249 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 FUNDC1Q8IVP5 155 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 PARP8Q8N3A8 854 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 CENPIQ92674 756 aaPredicted RBP12.87□□□□□ -0.35
CCDC60-201ENST00000327554 FKBP10Q96AY3 582 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 BFARQ9NZS9 450 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 ANKMY1Q9P2S6 941 aa12.87□□□□□ -0.35
CCDC60-201ENST00000327554 H0Y858 1186 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 PCYT1AP49585 367 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 HNRNPFP52597 415 aaKnown RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 PLA2G16P53816 162 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 RAD23AP54725 363 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 GJA9P57773 515 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 ZNF460Q14592 562 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 CBX2Q14781 532 aaPredicted RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 CERCAMQ5T4B2 595 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
CCDC60-201ENST00000327554 ANKRD13BQ86YJ7 626 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 GOLM1Q8NBJ4 401 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 ROPN1LQ96C74 230 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 NXNL1Q96CM4 212 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 TRIM15Q9C019 465 aa12.86□□□□□ -0.35
CCDC60-201ENST00000327554 RHOJQ9H4E5 214 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms