RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 HARS2P49590 506 aaKnown RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 THOP1P52888 689 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 SEMG2Q02383 582 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TARBP2Q15633 366 aaKnown RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 SPANXN3Q5MJ09 141 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 CLEC6AQ6EIG7 209 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 CROCCP3Q8IVE0 287 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 ZNF555Q8NEP9 628 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 SEMA3CQ99985 751 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 ZMYM5Q9UJ78 669 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TBC1D4O60343 1298 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TGDSO95455 350 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 RPL14P50914 215 aaKnown RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 RAP1GDS1P52306 607 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 POLD3Q15054 466 aaPredicted RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 ARFGAP1Q8N6T3 406 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TRPC4APQ8TEL6 797 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 C7orf26Q96N11 449 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 ROGDIQ9GZN7 287 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 ATAD3AQ9NVI7 634 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 COPG2Q9UBF2 871 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 COQ6Q9Y2Z9 468 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 YAP1P46937 504 aaKnown RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 SLC10A2Q12908 348 aaPredicted RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 LSAMPQ13449 338 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 RSBN1Q5VWQ0 802 aaPredicted RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 SLC9A4Q6AI14 798 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 PDSS2Q86YH6 399 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 CALML6Q8TD86 181 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 TSPAN17Q96FV3 270 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 GATA5Q9BWX5 397 aaPredicted RBP15.37■□□□□ 0.05
VARS2-201ENST00000321897 COQ10BQ9H8M1 238 aa15.37■□□□□ 0.05
VARS2-201ENST00000321897 FAM72CH0Y354 149 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 PSMD12O00232 456 aaPredicted RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 PLIN3O60664 434 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 CBFA2T3O75081 653 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 GLP2RO95838 553 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 CKMP06732 381 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 CNTFP26441 200 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 TKTP29401 623 aaKnown RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 WNT3AP56704 352 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 GNA12Q03113 381 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 BNIP3Q12983 259 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 PRKAA1Q13131 559 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 FAM72AQ5TYM5 149 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 FAM72DQ6L9T8 149 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 GALNT18Q6P9A2 607 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 CCDC80Q76M96 950 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 FAM72BQ86X60 149 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 SPNS2Q8IVW8 549 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 LRRC52Q8N7C0 313 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 DNAJB14Q8TBM8 379 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 SLCO2A1Q92959 643 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 ZBTB18Q99592 522 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 ABCB10Q9NRK6 738 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 UXTQ9UBK9 157 aaPredicted RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 A0A1B0GUL6 1792 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 F5H5T6 163 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 PIGRP01833 764 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 NFYCQ13952 458 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 MRNIPQ6NTE8 343 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 TRAF7Q6Q0C0 670 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 C1orf50Q9BV19 199 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 TIMMDC1Q9NPL8 285 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 MARCH2Q9P0N8 246 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 HEMK1Q9Y5R4 338 aaPredicted RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 TAF4O00268 1085 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 PQBP1O60828 265 aaKnown RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 ALOX15P16050 662 aaPredicted RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 PIK3CGP48736 1102 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 SLC7A2P52569 658 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 TAC4Q86UU9 113 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 HERC6Q8IVU3 1022 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 ACOX2Q99424 681 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 CLK4Q9HAZ1 481 aaKnown RBP15.36■□□□□ 0.05
VARS2-201ENST00000321897 VPS28Q9UK41 221 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 CEP290O15078 2479 aa15.36■□□□□ 0.05
VARS2-201ENST00000321897 A0A0G2JLL6 359 aaPredicted RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 KPNA4O00629 521 aaPredicted RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 RGS5O15539 181 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 CLIC3O95833 236 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 POM121L1PQ3SYA9 428 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 PRRT2Q7Z6L0 340 aaPredicted RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 ZNF778Q96MU6 729 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 PAAF1Q9BRP4 392 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 SORCS3Q9UPU3 1222 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 TEX264Q9Y6I9 313 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 TRPC5OSA6NMA1 111 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 BTN3A1O00481 513 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 AKR1A1P14550 325 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 TEX44Q53QW1 395 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 OSTM1Q86WC4 334 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 DQX1Q8TE96 717 aaKnown RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 DENND1AQ8TEH3 1009 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 RSPH1Q8WYR4 309 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 GATA6Q92908 595 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 SKA1Q96BD8 255 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 MTFMTQ96DP5 389 aaKnown RBP15.35■□□□□ 0.05
VARS2-201ENST00000321897 IL22Q9GZX6 179 aa15.35■□□□□ 0.05
VARS2-201ENST00000321897 PNPLA3Q9NST1 481 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms