RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ARMCX2Q7L311 632 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 XYLT1Q86Y38 959 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 METTL25Q8N6Q8 603 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 GMCL1P1Q8NEA9 526 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 OR10Q1Q8NGQ4 319 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ESAMQ96AP7 390 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PPM1MQ96MI6 270 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SLC29A1Q99808 456 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 KATNAL1Q9BW62 490 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 NAA50Q9GZZ1 169 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TXNRD2Q9NNW7 524 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SIRPGQ9P1W8 387 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 GMPR2Q9P2T1 348 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ANAPC2Q9UJX6 822 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 A6NL46 340 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PDZK1P1A8MUH7 402 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 E5RI56 91 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 H3BMM5 538 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TMX2-CTNND1H3BSU7 103 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TP73O15350 636 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ARHGEF9O43307 516 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 NOBOXO60393 691 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 RSL1D1O76021 490 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CAPN1P07384 714 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 FGF3P11487 239 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 HGFP14210 728 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 IL7RP16871 459 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 HLA-DPA1P20036 260 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CHRM3P20309 590 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 AZGP1P25311 298 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 VEGFBP49765 207 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 LAMTOR4Q0VGL1 99 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 IKBKEQ14164 716 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 AGAP9Q5VTM2 703 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 BROXQ5VW32 411 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 LIPMQ5VYY2 423 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 DPY19L2P1Q6NXN4 242 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ZDHHC13Q8IUH4 622 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ATG16L2Q8NAA4 619 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CLEC4CQ8WTT0 213 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 VPS33AQ96AX1 596 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 IFT43Q96FT9 208 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TWNKQ96RR1 684 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PARK7Q99497 189 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 HEPHQ9BQS7 1158 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 FEM1AQ9BSK4 669 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 NAT9Q9BTE0 207 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 APOL5Q9BWW9 433 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SPATC1LQ9H0A9 340 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SDCBP2Q9H190 292 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CD274Q9NZQ7 290 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 FAM50BQ9Y247 325 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TIMM22Q9Y584 194 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 COPG1Q9Y678 874 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 B4GAT1O43505 415 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 MFSD11O43934 449 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 MYO1DO94832 1006 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 GNAO1P09471 354 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ETV4P43268 484 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CDK9P50750 372 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 BCAP31P51572 246 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PTP4A2Q12974 167 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CRHR2Q13324 411 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 C8orf59Q8N0T1 100 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 FNDC5Q8NAU1 212 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 LRRC39Q96DD0 335 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 FDXACB1Q9BRP7 624 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 BDH2Q9BUT1 245 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 AMBNQ9NP70 447 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 NDFIP2Q9NV92 336 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 GIN1Q9NXP7 522 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SCN3BQ9NY72 215 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SPATA7Q9P0W8 599 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PCDHB12Q9Y5F1 795 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TLL2Q9Y6L7 1015 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 RECQL5O94762 991 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 APOA4P06727 396 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ZBTB48P10074 688 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CD151P48509 253 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SLC18A1P54219 525 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 RELAQ04206 551 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF252P-AS1Q0IIN9 211 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CAPSQ13938 189 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PPP1R3AQ16821 1122 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SCARA3Q6AZY7 606 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 REP15Q6BDI9 236 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 THOC7Q6I9Y2 204 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 NAPEPLDQ6IQ20 393 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 PIWIL3Q7Z3Z3 882 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SZRD1Q7Z422 152 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 TFAP2DQ7Z6R9 452 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 CAND1Q86VP6 1230 aaKnown RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 FSTL5Q8N475 847 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF276Q8N554 614 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 ITFG1Q8TB96 612 aa7.58□□□□□ -1.2
CDHR3-201ENST00000317716 SLC2A14Q8TDB8 520 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms