RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ANGEL2Q5VTE6 544 aaKnown RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 IZUMO3Q5VZ72 239 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 SLC9A4Q6AI14 798 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 EID3Q8N140 333 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF786Q8N393 782 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 PARP8Q8N3A8 854 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 ZCCHC7Q8N3Z6 543 aaKnown RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 EFCAB3Q8N7B9 438 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 OR6F1Q8NGZ6 308 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 FEZF2Q8TBJ5 459 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 SEMA4DQ92854 862 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 DUS3LQ96G46 650 aaKnown RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 PIP5K1AQ99755 562 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 GPN2Q9H9Y4 310 aaPredicted RBP6.71□□□□□ -1.34
ZNF540-201ENST00000316433 XPNPEP1Q9NQW7 623 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 MAN2B2Q9Y2E5 1009 aa6.71□□□□□ -1.34
ZNF540-201ENST00000316433 TCRBV7S2A1N4TA0A589 114 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF98A6NK75 572 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PLOD2O00469 737 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 RAD51BO15315 384 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 NOS1APO75052 506 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 ZBTB7AO95365 584 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 IFNA16P05015 189 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 GSNP06396 782 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 MLNP12872 115 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TPSB2P20231 275 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 NLRP11P59045 1033 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 NFX1Q12986 1120 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TPSAB1Q15661 275 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 KYAT1Q16773 422 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PPP1R3AQ16821 1122 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TEX44Q53QW1 395 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 ALFQ53S48 1182 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TFDP3Q5H9I0 405 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 FAXCQ5TGI0 409 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TTC33Q6PID6 262 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PRR23BQ6ZRT6 265 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 HID1Q8IV36 788 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SNX31Q8N9S9 440 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CMASQ8NFW8 434 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 RAB2BQ8WUD1 216 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CIDECQ96AQ7 238 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 AKT1S1Q96B36 256 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 RILPQ96NA2 401 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CDRT15Q96T59 188 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TUBA1CQ9BQE3 449 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CPVLQ9H3G5 476 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 C12orf65Q9H3J6 166 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PLSCR3Q9NRY6 295 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 INTS7Q9NVH2 962 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PAQR5Q9NXK6 330 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 STON1Q9Y6Q2 735 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CROCCQ5TZA2 2017 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PRSS51A0A1B0GVH4 220 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 KDM4FA0A1W2PPD8 638 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 FAM155AB1AL88 458 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 C19orf81C9J6K1 198 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 K7ENM7 598 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 KCNQ2O43526 872 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PTPN1P18031 435 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SERPINB9P50453 376 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SERPINH1P50454 418 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 BNIP2Q12982 314 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SLC13A2Q13183 592 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TOP3AQ13472 1001 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 KCNJ11Q14654 390 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PPP2R5DQ14738 602 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 MGAT5BQ3V5L5 792 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SPATS1Q496A3 300 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 C10orf62Q5T681 223 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 ARSKQ6UWY0 536 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 KCTD1Q719H9 257 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 LACC1Q8IV20 430 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 WDR49Q8IV35 697 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CDH26Q8IXH8 852 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 PM20D2Q8IYS1 436 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TMEM102Q8N9M5 508 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 NRBF2Q96F24 287 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 RPRD1AQ96P16 312 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 TTPALQ9BTX7 342 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 C20orf96Q9NUD7 363 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 DICER1Q9UPY3 1922 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SOCS7O14512 581 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CTDSP2O14595 271 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 CDK14O94921 469 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 VNN1O95497 513 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 DLGAP3O95886 979 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 MX2P20592 715 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 ITGALP20701 1170 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 MATN1P21941 496 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 UQCRC1P31930 480 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 ARL2P36404 184 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 AQP5P55064 265 aa6.7□□□□□ -1.34
ZNF540-201ENST00000316433 SLC25A11Q02978 314 aaKnown RBP6.7□□□□□ -1.34
ZNF540-201ENST00000316433 DBPQ10586 325 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms