RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 DDX3XO00571 662 aaKnown RBP eCLIP12.81□□□□□ -0.362e-43■■■■■ 45.3
CKS2-201ENST00000314355 TRIM38O00635 465 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 RAD51BO15315 384 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 SERPING1P05155 500 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 KRT10P13645 584 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 SERPINB6P35237 376 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 ACTN2P35609 894 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 EIF4A3P38919 411 aaKnown RBP12.81□□□□□ -0.36
CKS2-201ENST00000314355 PEX5P50542 639 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 SCNN1BP51168 640 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 ZBED6P86452 979 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 SEMG2Q02383 582 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 FGL2Q14314 439 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 KRT81Q14533 505 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 ZNF235Q14590 738 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 IQCB1Q15051 598 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 ELOCQ15369 112 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 C19orf48Q6RUI8 117 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 KDM7AQ6ZMT4 941 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 LSMEM2Q8N112 164 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 NDUFAF2Q8N183 169 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 SLC22A18ASQ8N1D0 253 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 NETO2Q8NC67 525 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 MAPK15Q8TD08 544 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 HNRNPLLQ8WVV9 542 aaKnown RBP12.81□□□□□ -0.36
CKS2-201ENST00000314355 HSPH1Q92598 858 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 CENPTQ96BT3 561 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 DEPDC7Q96QD5 511 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
CKS2-201ENST00000314355 KLF6Q99612 283 aaPredicted RBP12.81□□□□□ -0.36
CKS2-201ENST00000314355 SYT11Q9BT88 431 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 KLC2Q9H0B6 622 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 SEPT3Q9UH03 358 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 APOBEC3BQ9UH17 382 aaKnown RBP12.81□□□□□ -0.36
CKS2-201ENST00000314355 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 RAXQ9Y2V3 346 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.81□□□□□ -0.363e-8■□□□□ 9.4
CKS2-201ENST00000314355 CEP295Q9C0D2 2601 aa12.81□□□□□ -0.36
CKS2-201ENST00000314355 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 CPED1A4D0V7 1026 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 CFAP69A5D8W1 941 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 EIF4E1BA6NMX2 242 aaKnown RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 INSIG1O15503 277 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 LRCH4O75427 683 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 NEBLO76041 1014 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 PIGNO95427 931 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 TPM1P09493 284 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 ALPIP09923 528 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 KELP23276 732 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 HSPA9P38646 679 aaKnown RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 ADKP55263 362 aaKnown RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 PFN3P60673 137 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 NR0B2Q15466 257 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 CA9Q16790 459 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 SKOR2Q2VWA4 1001 aaPredicted RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 LRRC73Q5JTD7 316 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 CCDC122Q5T0U0 273 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 ENPP7Q6UWV6 458 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 MARCH9Q86YJ5 346 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 CAMK1DQ8IU85 385 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 PHACTR4Q8IZ21 702 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 SDR16C5Q8N3Y7 309 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 FSTL5Q8N475 847 aaPredicted RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 WDR48Q8TAF3 677 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 ZNF599Q96NL3 588 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 CBX8Q9HC52 389 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 ZNHIT6Q9NWK9 470 aaKnown RBP12.8□□□□□ -0.36
CKS2-201ENST00000314355 KCTD5Q9NXV2 234 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 LHX3Q9UBR4 397 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
CKS2-201ENST00000314355 CACNB4O00305 520 aaPredicted RBP12.79□□□□□ -0.36
CKS2-201ENST00000314355 PDE2AO00408 941 aaPredicted RBP12.79□□□□□ -0.36
CKS2-201ENST00000314355 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 RASGRP1O95267 797 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 TNFP01375 233 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 CAPNS1P04632 268 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 ABCG1P45844 678 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 AP1S1P61966 158 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 INSM1Q01101 510 aaPredicted RBP12.79□□□□□ -0.36
CKS2-201ENST00000314355 LBRQ14739 615 aaKnown RBP12.79□□□□□ -0.36
CKS2-201ENST00000314355 DEFB133Q30KQ1 61 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 MACC1Q6ZN28 852 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 RD3Q7Z3Z2 195 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 LUZP1Q86V48 1076 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 GKN2Q86XP6 184 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 TSEN2Q8NCE0 465 aaKnown RBP12.79□□□□□ -0.36
CKS2-201ENST00000314355 IFI44Q8TCB0 444 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 NAT6Q93015 286 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 GRAMD1AQ96CP6 724 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 TBATAQ96M53 351 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 PDFQ9HBH1 243 aa12.79□□□□□ -0.36
CKS2-201ENST00000314355 PCDH12Q9NPG4 1184 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms