RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 PYROXD2Q8N2H3 581 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 RTL3Q8N8U3 475 aaKnown RBP8.25□□□□□ -1.09
TPM3-203ENST00000312970 DENND6BQ8NEG7 585 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 HCAR2Q8TDS4 363 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 VOPP1Q96AW1 172 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 CENPTQ96BT3 561 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 GDAP1L1Q96MZ0 367 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 ERGIC2Q96RQ1 377 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
TPM3-203ENST00000312970 C1QTNF7Q9BXJ2 289 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 CPEB1Q9BZB8 566 aaKnown RBP8.25□□□□□ -1.09
TPM3-203ENST00000312970 NOL6Q9H6R4 1146 aaKnown RBP8.25□□□□□ -1.09
TPM3-203ENST00000312970 CATSPERBQ9H7T0 1116 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 CAAP1Q9H8G2 361 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 SEPT11Q9NVA2 429 aaKnown RBP8.25□□□□□ -1.09
TPM3-203ENST00000312970 DONSONQ9NYP3 566 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 NCKIPSDQ9NZQ3 722 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 DKK3Q9UBP4 350 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 SALL4Q9UJQ4 1053 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 FZD10Q9ULW2 581 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 NEU3Q9UQ49 428 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 MFHAS1Q9Y4C4 1052 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 RAI2Q9Y5P3 530 aa8.25□□□□□ -1.09
TPM3-203ENST00000312970 USP9XQ93008 2570 aaPredicted RBP8.24□□□□□ -1.09
TPM3-203ENST00000312970 CHD5Q8TDI0 1954 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 TCRBV5S1A1TA0A578 114 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 CPED1A4D0V7 1026 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 LGALS16A8MUM7 142 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 RASA4BC9J798 803 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 TPP1O14773 563 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 SPINT1O43278 529 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 CCP110O43303 1012 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 RASA4O43374 803 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 MMP20O60882 483 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 TM7SF2O76062 418 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 TMCC1O94876 653 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 IGSF6O95976 241 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 TIMP2P16035 220 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 DESP17661 470 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 TNFAIP3P21580 790 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 SUOXP51687 545 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 RHOAP61586 193 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 RPL7AP62424 266 aaKnown RBP8.24□□□□□ -1.09
TPM3-203ENST00000312970 MYL5Q02045 173 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 EIF2B5Q13144 721 aaKnown RBP8.24□□□□□ -1.09
TPM3-203ENST00000312970 PARP15Q460N3 678 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 ACAD10Q6JQN1 1059 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 DNAJC24Q6P3W2 148 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 DCUN1D2Q6PH85 259 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 ZNF605Q86T29 641 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 MCOLN2Q8IZK6 566 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 UMODL1-AS1Q8N2C9 162 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 ZNF843Q8N446 348 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 ZNF548Q8NEK5 533 aaPredicted RBP8.24□□□□□ -1.09
TPM3-203ENST00000312970 SNIP1Q8TAD8 396 aaKnown RBP8.24□□□□□ -1.09
TPM3-203ENST00000312970 IFI44Q8TCB0 444 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 MAPK15Q8TD08 544 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 LMX1AQ8TE12 382 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 CXorf40AQ8TE69 158 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 HMCESQ96FZ2 354 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 VCPIP1Q96JH7 1222 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 MCEEQ96PE7 176 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 DEPDC7Q96QD5 511 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 IL12RB2Q99665 862 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 CNPY3Q9BT09 278 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 KLC2Q9H0B6 622 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 PRORYQ9H606 182 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 SPASTQ9UBP0 616 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 KLF15Q9UIH9 416 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 FKBPLQ9UIM3 349 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 ITM2BQ9Y287 266 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 COL6A6A6NMZ7 2263 aa8.24□□□□□ -1.09
TPM3-203ENST00000312970 FLNCQ14315 2725 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 LY6G6EA0A0G2JKS1 128 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 EME2A4GXA9 379 aaPredicted RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 TMEM110-MUSTN1A8MSY1 372 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 TK2O00142 265 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 SMAPO00193 183 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 ATXN7O15265 892 aaPredicted RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 FGF10O15520 208 aaPredicted RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 USP12O75317 370 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 CSO75390 466 aaKnown RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 FERP16591 822 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 ITIH2P19823 946 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 XPAP23025 273 aaPredicted RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 HTR7P34969 479 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 LSSP48449 732 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 RPIAP49247 311 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 PEX5P50542 639 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 NDST2P52849 883 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 ADKP55263 362 aaKnown RBP8.23□□□□□ -1.09
TPM3-203ENST00000312970 ELP6Q0PNE2 266 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 GRM3Q14832 879 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 CYTH1Q15438 398 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 NR0B2Q15466 257 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 STX1AQ16623 288 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 CDKN3Q16667 212 aa8.23□□□□□ -1.09
TPM3-203ENST00000312970 KLHL40Q2TBA0 621 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms