RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 NEPROQ6NW34 567 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 CMC1Q7Z7K0 106 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
HOXC5-201ENST00000312492 DENND6AQ8IWF6 608 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 ANKS4BQ8N8V4 417 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 ARMC2Q8NEN0 867 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 OR13J1Q8NGT2 312 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 BRSK1Q8TDC3 778 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 PEX13Q92968 403 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 ZNF707Q96C28 371 aaPredicted RBP17.12■□□□□ 0.33
HOXC5-201ENST00000312492 GRAMD1AQ96CP6 724 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 NSMCE3Q96MG7 304 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 CERS4Q9HA82 394 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 GGT7Q9UJ14 662 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 CLEC4EQ9ULY5 219 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 RAI2Q9Y5P3 530 aa17.12■□□□□ 0.33
HOXC5-201ENST00000312492 SLC7A4O43246 635 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 SNX3O60493 162 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 PRAMEF12O95522 483 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 CD70P32970 193 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 PRAMEP78395 509 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 MPP1Q00013 466 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 SLC12A1Q13621 1099 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 GRM3Q14832 879 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 PLEKHG6Q3KR16 790 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 NCEH1Q6PIU2 408 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 KYAT3Q6YP21 454 aaKnown RBP17.11■□□□□ 0.33
HOXC5-201ENST00000312492 KIAA0408Q6ZU52 694 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 C2CD4AQ8NCU7 369 aaPredicted RBP17.11■□□□□ 0.33
HOXC5-201ENST00000312492 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 GPR22Q99680 433 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 ADGRE3Q9BY15 652 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 TBC1D14Q9P2M4 693 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 PHTF1Q9UMS5 762 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 MRPS23Q9Y3D9 190 aaKnown RBP17.11■□□□□ 0.33
HOXC5-201ENST00000312492 PCDHGC4Q9Y5F7 938 aa17.11■□□□□ 0.33
HOXC5-201ENST00000312492 LAMA2P24043 3122 aaKnown RBP17.11■□□□□ 0.33
HOXC5-201ENST00000312492 CRTAMO95727 393 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 AHSGP02765 367 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 PRKCGP05129 697 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 CEBPBP17676 345 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 USP4Q13107 963 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 ITIH4Q14624 930 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 ZNF77Q15935 545 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 INSCQ1MX18 579 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 METTL3Q86U44 580 aaKnown RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 TRIM42Q8IWZ5 723 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 LPCAT1Q8NF37 534 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 NUP210Q8TEM1 1887 aaPredicted RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 MFSD1Q9H3U5 465 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 TLE6Q9H808 572 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 FBXO5Q9UKT4 447 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 EDF1O60869 148 aaKnown RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 TOP3BO95985 862 aaKnown RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 MT-CO1P00395 513 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 PIRTP0C851 137 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 TCF3P15923 654 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 PBX2P40425 430 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 CD151P48509 253 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 PLK1P53350 603 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 AP1S1P61966 158 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 PPM1JQ5JR12 505 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 N4BP2L1Q5TBK1 243 aaPredicted RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 SPATA21Q7Z572 469 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 SRLQ86TD4 932 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 TMEM25Q86YD3 366 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 LMNTD2Q8IXW0 634 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 ZNF557Q8N988 423 aaPredicted RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 CCDC63Q8NA47 563 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 OR6P1Q8NGX9 317 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 HDAC10Q969S8 669 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 CAB39LQ9H9S4 337 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 SLC39A10Q9ULF5 831 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 USP15Q9Y4E8 981 aaPredicted RBP17.1■□□□□ 0.33
HOXC5-201ENST00000312492 KCTD3Q9Y597 815 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 ARL5AQ9Y689 179 aa17.1■□□□□ 0.33
HOXC5-201ENST00000312492 A0A096LPK6 155 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 NEDD8-MDP1E9PL57 170 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 GSTA1P08263 222 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 GABRB3P28472 473 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 POLD2P49005 469 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 ACVR1Q04771 509 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 SF3A3Q12874 501 aaKnown RBP eCLIP17.09■□□□□ 0.33
HOXC5-201ENST00000312492 TRAF2Q12933 501 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 USP10Q14694 798 aaKnown RBP17.09■□□□□ 0.33
HOXC5-201ENST00000312492 PITRM1Q5JRX3 1037 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 ATXN7L2Q5T6C5 722 aaPredicted RBP17.09■□□□□ 0.33
HOXC5-201ENST00000312492 RAPH1Q70E73 1250 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 GLT6D1Q7Z4J2 308 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 PTAR1Q7Z6K3 402 aaPredicted RBP17.09■□□□□ 0.33
HOXC5-201ENST00000312492 STYXQ8WUJ0 223 aa17.09■□□□□ 0.33
HOXC5-201ENST00000312492 ZSWIM3Q96MP5 696 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms