RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 SNX1Q13596 522 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 CYP2U1Q7Z449 544 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 ZNF567Q8N184 647 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 ARRDC2Q8TBH0 407 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 RAB7BQ96AH8 199 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 FAM131CQ96AQ9 280 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 TEKT5Q96M29 485 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 RBM15Q96T37 977 aaKnown RBP eCLIP17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 NAPGQ99747 312 aaPredicted RBP17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 PCED1AQ9H1Q7 454 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 KDM4CQ9H3R0 1056 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 GLOD4Q9HC38 313 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 NCDNQ9UBB6 729 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 SNX12Q9UMY4 172 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 ITM2BQ9Y287 266 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 PCDHB9Q9Y5E1 797 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 RAI2Q9Y5P3 530 aa17.64■□□□□ 0.42
SWSAP1-201ENST00000312423 ATXN2Q99700 1313 aaKnown RBP17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 CTAGE9A4FU28 777 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 UPK3BL1B0FP48 263 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 UPK3BL2E5RIL1 263 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 PROB1E7EW31 1015 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 TRAFD1O14545 582 aaPredicted RBP17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 ZNF189O75820 626 aaPredicted RBP17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 CPP00450 1065 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 TIMP2P16035 220 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 NFKB1P19838 968 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 UGP2Q16851 508 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 ARMC12Q5T9G4 340 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 SLC35B2Q8TB61 432 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 HCAR2Q8TDS4 363 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 MS4A14Q96JA4 679 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 TMEM121Q9BTD3 319 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 FRMD8P1Q9BZ68 369 aaPredicted RBP17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 MIR1-1HGQ9H1L0 117 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 PREBQ9HCU5 417 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 RSPH14Q9UHP6 348 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 TRHDEQ9UKU6 1024 aa17.64■□□□□ 0.41
SWSAP1-201ENST00000312423 TSPAN11A1L157 253 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 METTL12A8MUP2 240 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 LIASO43766 372 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 RNGTTO60942 597 aaKnown RBP17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 PRKCGP05129 697 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 ITPKAP23677 461 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 MAOBP27338 520 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 MAT2AP31153 395 aaKnown RBP17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 PPP2CBP62714 309 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 POLR2LP62875 67 aaKnown RBP17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 PPP2CAP67775 309 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 WDR45BQ5MNZ6 344 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 ERAP2Q6P179 960 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 ZSWIM9Q86XI8 627 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 FAM71DQ8N9W8 422 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 COG1Q8WTW3 980 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 PIGKQ92643 395 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 BIRC7Q96CA5 298 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 ECHDC3Q96DC8 303 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 LOXL4Q96JB6 756 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 SLC25A51Q9H1U9 297 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 OGFRQ9NZT2 677 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 GGT7Q9UJ14 662 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 ZNF148Q9UQR1 794 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 FADS3Q9Y5Q0 445 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 SDK1Q7Z5N4 2213 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 VPS13AQ96RL7 3174 aa17.63■□□□□ 0.41
SWSAP1-201ENST00000312423 A0A1W2PQ67 120 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 PGRMC1O00264 195 aaKnown RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 HTRA2O43464 458 aaPredicted RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 H2AFXP16104 143 aaPredicted RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 TCP1P17987 556 aaKnown RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 EPHB1P54762 984 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 FAM193AP78312 1265 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 PCSK7Q16549 785 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 ITPRIPL1Q6GPH6 555 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 SPATA22Q8NHS9 363 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 CCDC110Q8TBZ0 833 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 IMP4Q96G21 291 aaKnown RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 NAP1L3Q99457 506 aaPredicted RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 ARRDC1-AS1Q9H2J1 176 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 PCDH12Q9NPG4 1184 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 FAM53CQ9NYF3 392 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 UBP1Q9NZI7 540 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 EIF2B4Q9UI10 523 aaKnown RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 CHKBQ9Y259 395 aa17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 TNRC6BQ9UPQ9 1833 aaKnown RBP17.62■□□□□ 0.41
SWSAP1-201ENST00000312423 A0A1W2PQU0 124 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 CFAP69A5D8W1 941 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ZNF185O15231 689 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 AP1G1O43747 822 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 EPN2O95208 641 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 PGLSO95336 258 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 MMP2P08253 660 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ITIH2P19823 946 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 CD68P34810 354 aaPredicted RBP17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 SUOXP51687 545 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 SKOR1P84550 965 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 SEMG2Q02383 582 aa17.61■□□□□ 0.41
SWSAP1-201ENST00000312423 ELP6Q0PNE2 266 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms