RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ATP5F1P24539 256 aaPredicted RBP25.52■■□□□ 1.68
HOXB3-201ENST00000311626 DSC2Q02487 901 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 PTK2BQ14289 1009 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 IYDQ6PHW0 289 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 PKMYT1Q99640 499 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 SLCO1B7G3V0H7 640 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 RNASEH2AO75792 299 aaKnown RBP25.52■■□□□ 1.68
HOXB3-201ENST00000311626 CNTN5O94779 1100 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 HAPLN1P10915 354 aaPredicted RBP25.52■■□□□ 1.68
HOXB3-201ENST00000311626 YWHAQP27348 245 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 ETFBP38117 255 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 ARSDP51689 593 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 NME5P56597 212 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 SLC10A7Q0GE19 358 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 MANEALQ5VSG8 457 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 TAF2Q6P1X5 1199 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 KLHDC8BQ8IXV7 354 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 CEP70Q8NHQ1 597 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 HAPLN3Q96S86 360 aa25.52■■□□□ 1.68
HOXB3-201ENST00000311626 FBRSL1Q9HCM7 1045 aaKnown RBP25.52■■□□□ 1.68
HOXB3-201ENST00000311626 ZNF189O75820 626 aaPredicted RBP25.51■■□□□ 1.68
HOXB3-201ENST00000311626 CSPG5O95196 566 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 ATP6V1B1P15313 513 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 FGFR3P22607 806 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 PRKAA2P54646 552 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 XIAPP98170 497 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 GRM2Q14416 872 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 TECRLQ5HYJ1 363 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 MAP3K21Q5TCX8 1036 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 IL23RQ5VWK5 629 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 TMEM207Q6UWW9 146 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 CRYL1Q9Y2S2 319 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 AP4B1Q9Y6B7 739 aa25.51■■□□□ 1.68
HOXB3-201ENST00000311626 ACOT8O14734 319 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 PEX1O43933 1283 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 PSME3P61289 254 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 PITRM1Q5JRX3 1037 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 PIK3R6Q5UE93 754 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 CUZD1Q86UP6 607 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 MFN1Q8IWA4 741 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 SLC39A3Q9BRY0 314 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 SENP6Q9GZR1 1112 aaPredicted RBP25.51■■□□□ 1.67
HOXB3-201ENST00000311626 ALG9Q9H6U8 611 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 ABI2Q9NYB9 513 aaPredicted RBP25.51■■□□□ 1.67
HOXB3-201ENST00000311626 MARCH4Q9P2E8 410 aaPredicted RBP25.51■■□□□ 1.67
HOXB3-201ENST00000311626 GIMAP2Q9UG22 337 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 PADI3Q9ULW8 664 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 GIT1Q9Y2X7 761 aa25.51■■□□□ 1.67
HOXB3-201ENST00000311626 NPHS1O60500 1241 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 SMIM18P0DKX4 95 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 PAMP19021 973 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 HOXC8P31273 242 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 ZNF135P52742 658 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 CDKN2DP55273 166 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 GPR158Q5T848 1215 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 CYP2R1Q6VVX0 501 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 SPATA2LQ8IUW3 424 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 RYBPQ8N488 228 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 PDCD6IPQ8WUM4 868 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 NMD3Q96D46 503 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 HMCESQ96FZ2 354 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 SYT17Q9BSW7 474 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 ABCC13Q9NSE7 274 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 PCDHGA7Q9Y5G6 932 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 FBP2O00757 339 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 UBFD1O14562 309 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 CAPN15O75808 1086 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 SPATA31D3P0C874 917 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 RPL9P32969 192 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 THPOP40225 353 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 POU4F1Q01851 419 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 NRF1Q16656 503 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 DDR2Q16832 855 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 RARS2Q5T160 578 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 KIAA0930Q6ICG6 404 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 KDELC1Q6UW63 502 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 SPATA31D4Q6ZUB0 917 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 PIWIL4Q7Z3Z4 852 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 SETD3Q86TU7 594 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 CIR1Q86X95 450 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 RSPH1Q8WYR4 309 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 PTGDR2Q9Y5Y4 395 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 A0A087X1B8 175 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 A0A1B0GTW7 788 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 BCAS2O75934 225 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 CELF2O95319 508 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 CDH13P55290 713 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 FAM83EQ2M2I3 478 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 RTL3Q8N8U3 475 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 TRPV1Q8NER1 839 aa25.5■■□□□ 1.67
HOXB3-201ENST00000311626 MRPL1Q9BYD6 325 aaKnown RBP25.5■■□□□ 1.67
HOXB3-201ENST00000311626 GLTPD2A6NH11 291 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 TRPC5OSA6NMA1 111 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 C9JVG2 144 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 PPP6CO00743 305 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 TBX18O95935 607 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 DNAJB2P25686 324 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 SLC39A12Q504Y0 691 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 ALFQ53S48 1182 aa25.49■■□□□ 1.67
HOXB3-201ENST00000311626 HECTD2Q5U5R9 776 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms