RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 QPRTQ15274 297 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 AMIGO2Q86SJ2 522 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 ASZ1Q8WWH4 475 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 BHMTQ93088 406 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PRKAG3Q9UGI9 489 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 C5orf60A6NFR6 353 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 KPNA5O15131 536 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 LRIG2O94898 1065 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 FGFR1P11362 822 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 LY6KQ17RY6 165 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 CRTC3Q6UUV7 619 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 TRIM48Q8IWZ4 208 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 REXO5Q96IC2 774 aaKnown RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 RBM4BQ9BQ04 359 aaKnown RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 RBM4Q9BWF3 364 aaKnown RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 LMO7Q8WWI1 1683 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 CYP1B1Q16678 543 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PACS1Q6VY07 963 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 VSIG10LQ86VR7 867 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PTCD2Q8WV60 388 aaKnown RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 HSD3B7Q9H2F3 369 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 DKK3Q9UBP4 350 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 SLC28A1O00337 649 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 AZIN1O14977 448 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 SLC22A3O75751 556 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 COX7A2P14406 83 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 HPGDP15428 266 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 ZNF37AP17032 561 aaPredicted RBP13.25□□□□□ -0.29
SNED1-201ENST00000310397 SPATA19Q7Z5L4 167 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PTPRHQ9HD43 1115 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 XPR1Q9UBH6 696 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 KLQ9UEF7 1012 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 ING4Q9UNL4 249 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PCDHB5Q9Y5E4 795 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 CASTOR2A6NHX0 329 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 TMCC2O75069 709 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 ANXA5P08758 320 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 CAPGP40121 348 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 MACC1Q6ZN28 852 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 ZNF438Q7Z4V0 828 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 UBE2E3Q969T4 207 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 QRFPRQ96P65 431 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 QKIQ96PU8 341 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNED1-201ENST00000310397 ZFYVE28Q9HCC9 887 aa13.25□□□□□ -0.29
SNED1-201ENST00000310397 PIAS1O75925 651 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 LPCAT4Q643R3 524 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 APOBEC3HQ6NTF7 200 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 SPATA5L1Q9BVQ7 753 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 XRN1Q8IZH2 1706 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 GUCA1AP43080 201 aaPredicted RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 ARL4DP49703 201 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 GTF2A2P52657 109 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 LYPLAL1Q5VWZ2 237 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 KLHL1Q9NR64 748 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 MATN2O00339 956 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 SLC22A2O15244 555 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 RECQL4O94761 1208 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 PCSK2P16519 638 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 GOT1P17174 413 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 YWHAQP27348 245 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ENPEPQ07075 957 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 MCFD2Q8NI22 146 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 GUCY1B2O75343 617 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 SLC18A1P54219 525 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 C15orf52Q6ZUT6 534 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 SSR3Q9UNL2 185 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 SNCAIPQ9Y6H5 919 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 FCHO2Q0JRZ9 810 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 PAN2Q504Q3 1202 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 DENND5AQ6IQ26 1287 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 STRADAQ7RTN6 431 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ATL1Q8WXF7 558 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 TSPAN18Q96SJ8 248 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 SMAD5Q99717 465 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 WDR18Q9BV38 432 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 YIPF2Q9BWQ6 316 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ATP13A1Q9HD20 1204 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 TMA7Q9Y2S6 64 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 GPIP06744 558 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 CYP2B6P20813 491 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 PPIBP23284 216 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 PAX3P23760 479 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 RCVRNP35243 200 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 ZSWIM7Q19AV6 140 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 KHDC1Q4VXA5 237 aaKnown RBP13.24□□□□□ -0.29
SNED1-201ENST00000310397 ARMC12Q5T9G4 340 aa13.24□□□□□ -0.29
SNED1-201ENST00000310397 AFTPHQ6ULP2 937 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms