RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TBC1D3KA0A087X1G2 549 aa5□□□□□ -1.61
CAST-201ENST00000309190 TBC1D3FA6NER0 549 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 TBC1D3LB9A6J9 549 aa5□□□□□ -1.61
CAST-201ENST00000309190 HHLA1C9JL84 531 aa5□□□□□ -1.61
CAST-201ENST00000309190 SNX2O60749 519 aa5□□□□□ -1.61
CAST-201ENST00000309190 RTN3O95197 1032 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 VAPBO95292 243 aa5□□□□□ -1.61
CAST-201ENST00000309190 PAK4O96013 591 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 TBC1D3HP0C7X1 549 aa5□□□□□ -1.61
CAST-201ENST00000309190 DHRS4L1P0CG22 281 aa5□□□□□ -1.61
CAST-201ENST00000309190 RPL22P35268 128 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 COILP38432 576 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 CDKN2BP42772 138 aa5□□□□□ -1.61
CAST-201ENST00000309190 PSMD8P48556 350 aa5□□□□□ -1.61
CAST-201ENST00000309190 NSUN2Q08J23 767 aaKnown RBP eCLIP5□□□□□ -1.61
CAST-201ENST00000309190 ZBTB17Q13105 803 aa5□□□□□ -1.61
CAST-201ENST00000309190 HSP90AA5PQ58FG0 334 aa5□□□□□ -1.61
CAST-201ENST00000309190 ARHGAP17Q68EM7 881 aa5□□□□□ -1.61
CAST-201ENST00000309190 TBC1D3GQ6DHY5 549 aa5□□□□□ -1.61
CAST-201ENST00000309190 TBC1D3CQ6IPX1 549 aa5□□□□□ -1.61
CAST-201ENST00000309190 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 CHST9Q7L1S5 443 aa5□□□□□ -1.61
CAST-201ENST00000309190 LRRC34Q8IZ02 419 aa5□□□□□ -1.61
CAST-201ENST00000309190 TBC1D3Q8IZP1 549 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 PYROXD1Q8WU10 500 aa5□□□□□ -1.61
CAST-201ENST00000309190 TFB1MQ8WVM0 346 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 DYDC1Q8WWB3 177 aa5□□□□□ -1.61
CAST-201ENST00000309190 ZNF669Q96BR6 464 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 STAMBPL1Q96FJ0 436 aa5□□□□□ -1.61
CAST-201ENST00000309190 ANKRD27Q96NW4 1050 aa5□□□□□ -1.61
CAST-201ENST00000309190 MIPEPQ99797 713 aa5□□□□□ -1.61
CAST-201ENST00000309190 GPR63Q9BZJ6 419 aa5□□□□□ -1.61
CAST-201ENST00000309190 PRKD2Q9BZL6 878 aa5□□□□□ -1.61
CAST-201ENST00000309190 ELAC1Q9H777 363 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 SAMD15Q9P1V8 674 aa5□□□□□ -1.61
CAST-201ENST00000309190 FAM50BQ9Y247 325 aa5□□□□□ -1.61
CAST-201ENST00000309190 PI4KAP42356 2102 aa5□□□□□ -1.61
CAST-201ENST00000309190 hCG_1818297A0A087WSY0 165 aa5□□□□□ -1.61
CAST-201ENST00000309190 C3orf70A6NLC5 250 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 TNFRSF10BO14763 440 aa5□□□□□ -1.61
CAST-201ENST00000309190 CLGNO14967 610 aa5□□□□□ -1.61
CAST-201ENST00000309190 EFCAB14O75071 495 aa5□□□□□ -1.61
CAST-201ENST00000309190 PHF2O75151 1096 aa5□□□□□ -1.61
CAST-201ENST00000309190 STATHP02808 62 aa5□□□□□ -1.61
CAST-201ENST00000309190 POLBP06746 335 aa5□□□□□ -1.61
CAST-201ENST00000309190 HLA-FP30511 346 aa5□□□□□ -1.61
CAST-201ENST00000309190 DGKEP52429 567 aa5□□□□□ -1.61
CAST-201ENST00000309190 WDR4P57081 412 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 PFKPQ01813 784 aa5□□□□□ -1.61
CAST-201ENST00000309190 IFT88Q13099 833 aa5□□□□□ -1.61
CAST-201ENST00000309190 ZNF460Q14592 562 aa5□□□□□ -1.61
CAST-201ENST00000309190 STILQ15468 1287 aa5□□□□□ -1.61
CAST-201ENST00000309190 CNGA3Q16281 694 aa5□□□□□ -1.61
CAST-201ENST00000309190 ZRANB3Q5FWF4 1079 aa5□□□□□ -1.61
CAST-201ENST00000309190 RAPH1Q70E73 1250 aa5□□□□□ -1.61
CAST-201ENST00000309190 POLNQ7Z5Q5 900 aa5□□□□□ -1.61
CAST-201ENST00000309190 DDX51Q8N8A6 666 aaKnown RBP eCLIP5□□□□□ -1.61
CAST-201ENST00000309190 TXNDC5Q8NBS9 432 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 OR14C36Q8NHC7 312 aa5□□□□□ -1.61
CAST-201ENST00000309190 BPIFB1Q8TDL5 484 aa5□□□□□ -1.61
CAST-201ENST00000309190 SPATA17Q96L03 361 aa5□□□□□ -1.61
CAST-201ENST00000309190 NPY6RQ99463 290 aa5□□□□□ -1.61
CAST-201ENST00000309190 NSUN3Q9H649 340 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 WDR6Q9NNW5 1121 aaKnown RBP5□□□□□ -1.61
CAST-201ENST00000309190 KLF15Q9UIH9 416 aa5□□□□□ -1.61
CAST-201ENST00000309190 FBXW11Q9UKB1 542 aa5□□□□□ -1.61
CAST-201ENST00000309190 MTF2Q9Y483 593 aaPredicted RBP5□□□□□ -1.61
CAST-201ENST00000309190 FAM208BQ5VWN6 2430 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 C2CD4DB7Z1M9 353 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 AURKAO14965 403 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PAX7P23759 505 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PMLP29590 882 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 TFDP2Q14188 446 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SLC29A2Q14542 456 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ARSIQ5FYB1 569 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 XKR4Q5GH76 650 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ADGRF1Q5T601 910 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PKN3Q6P5Z2 889 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 TMEM150AQ86TG1 271 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SRRM1Q8IYB3 904 aaKnown RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 RCOR2Q8IZ40 523 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PQLC3Q8N755 202 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 C10orf82Q8WW14 230 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 JPH3Q8WXH2 748 aaPredicted RBP4.99□□□□□ -1.61
CAST-201ENST00000309190 NXPE3Q969Y0 559 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 TBC1D31Q96DN5 1066 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SAMD11Q96NU1 681 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 FMO2Q99518 471 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ZYG11BQ9C0D3 744 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 LHX5Q9H2C1 402 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 CAB39LQ9H9S4 337 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 KCNK12Q9HB15 430 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 LMCD1Q9NZU5 365 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 SLC2A6Q9UGQ3 507 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PCDHGC3Q9UN70 934 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PCDHA11Q9Y5I1 949 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 PIAS3Q9Y6X2 628 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 ALPK2Q86TB3 2170 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 OTOGLQ3ZCN5 2332 aa4.99□□□□□ -1.61
CAST-201ENST00000309190 CFAP73A6NFT4 308 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms