RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FGD3Q5JSP0 725 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 OTUD3Q5T2D3 398 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 UNC93AQ86WB7 457 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF513Q8N8E2 541 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TOP1MTQ969P6 601 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 HSFY1Q96LI6 401 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 CCDC68Q9H2F9 335 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ADNPQ9H2P0 1102 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 SOX17Q9H6I2 414 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 PRDM16Q9HAZ2 1276 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 MRGBPQ9NV56 204 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TRNAU1APQ9NX07 287 aaKnown RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 OAZ3Q9UMX2 235 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 MTF2Q9Y483 593 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 EVPLQ92817 2033 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 PTPRFP10586 1907 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 NPHS1O60500 1241 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 SLC4A1P02730 911 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 AKAP5P24588 427 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ADRA1BP35368 520 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TMED10P49755 219 aaKnown RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 CDH13P55290 713 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 LRP8Q14114 963 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 NR1D2Q14995 579 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 AARS2Q5JTZ9 985 aaKnown RBP11.23□□□□□ -0.61
PTPN7-201ENST00000309017 FBXO47Q5MNV8 452 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 AGAP9Q5VTM2 703 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 FAM219BQ5XKK7 198 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 Q6ZNX1 250 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ARMCX2Q7L311 632 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 LINC00523Q86TU6 105 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TTC16Q8NEE8 873 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TFAP2CQ92754 450 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 PLEKHA8Q96JA3 519 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TNIP3Q96KP6 325 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 SEPHS2Q99611 448 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TRIM8Q9BZR9 551 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF385DQ9H6B1 395 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 GID8Q9NWU2 228 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 TRHDEQ9UKU6 1024 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 DSEQ9UL01 958 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 ADAMTS5Q9UNA0 930 aa11.23□□□□□ -0.61
PTPN7-201ENST00000309017 COL6A2P12110 1019 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 FUT4P22083 530 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ARL1P40616 181 aaPredicted RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 TKTL1P51854 596 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 MAP3K7CLP57077 242 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 PPIL2Q13356 520 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 PMS2P3Q13401 168 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 VPS26BQ4G0F5 336 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF618Q5T7W0 954 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ABRAXAS1Q6UWZ7 409 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 RANBP9Q96S59 729 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 C1QTNF1Q9BXJ1 281 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 SPATC1LQ9H0A9 340 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 TRAF6Q9Y4K3 522 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 EI24O14681 340 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 NCAM2O15394 837 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 C22orf31O95567 290 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 CPB1P15086 417 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■■■□□ 15.6
PTPN7-201ENST00000309017 CD97P48960 835 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 PAFAH1B3Q15102 231 aaKnown RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 NHSL2Q5HYW2 709 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ARHGAP17Q68EM7 881 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 HFE2Q6ZVN8 426 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 OR6P1Q8NGX9 317 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 EDEM1Q92611 657 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 IPO11Q9UI26 975 aaKnown RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 NUP205Q92621 2012 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 A0A0J9YYE9 177 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 TCRBV3S1A0A5B6 114 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 BCL10O95999 233 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 DPEP1P16444 411 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 CD68P34810 354 aaPredicted RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 SLC1A2P43004 574 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 GNA12Q03113 381 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 BFSP2Q13515 415 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 RAB39AQ14964 217 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF354CQ86Y25 554 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 NRBF2Q96F24 287 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 NAA50Q9GZZ1 169 aaKnown RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 DUS2Q9NX74 493 aaKnown RBP11.22□□□□□ -0.61
PTPN7-201ENST00000309017 SLC2A6Q9UGQ3 507 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 FBXO5Q9UKT4 447 aa11.22□□□□□ -0.61
PTPN7-201ENST00000309017 TSPAN1O60635 241 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 DAB1O75553 588 aa11.21□□□□□ -0.61
PTPN7-201ENST00000309017 IPO13O94829 963 aaKnown RBP11.21□□□□□ -0.61
PTPN7-201ENST00000309017 PORP16435 677 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms