RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SDC3O75056 442 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 PROS1P07225 676 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 KRT7P08729 469 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 C1QTNF9P0C862 333 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 MAN1A1P33908 653 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 HSPA9P38646 679 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 SLC10A7Q0GE19 358 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 PDK2Q15119 407 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 ST3GAL2Q16842 350 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 LRRC49Q8IUZ0 686 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 MAP7D3Q8IWC1 876 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 KCTD6Q8NC69 237 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 GATA6Q92908 595 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 CENPTQ96BT3 561 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 WRAP53Q9BUR4 548 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 PCDH12Q9NPG4 1184 aa26.68■■□□□ 1.86
CDKN2A-201ENST00000304494 SPTY2D1-AS1A0A0U1RR47 76 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 ITIH2P19823 946 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 IL4RP24394 825 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 GJC1P36383 396 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 SCNN1BP51168 640 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 ARSEP51690 589 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 POLR2LP62875 67 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 HS1BP3Q53T59 392 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 PAF1Q8N7H5 531 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 ZNF670Q9BS34 389 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 TMEM121BQ9BXQ6 578 aaPredicted RBP26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 TRIM5Q9C035 493 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 SPTLC3Q9NUV7 552 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 ATP8A1Q9Y2Q0 1164 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 PCDHGA1Q9Y5H4 931 aa26.67■■□□□ 1.86
CDKN2A-201ENST00000304494 CHD8Q9HCK8 2581 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 CEP295Q9C0D2 2601 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 TMEM8BA6NDV4 472 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 RIOK3O14730 519 aaKnown RBP26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 CD48P09326 243 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 DGKAP23743 735 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 PFN3P60673 137 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 TBX2Q13207 712 aaPredicted RBP26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 PDE1CQ14123 709 aaPredicted RBP26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 DPYSL3Q14195 570 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 PARGQ86W56 976 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 RHOT2Q8IXI1 618 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 GALNT15Q8N3T1 639 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 ECHDC3Q96DC8 303 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 DNAJC28Q9NX36 388 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 ASPMQ8IZT6 3477 aa26.66■■□□□ 1.86
CDKN2A-201ENST00000304494 H3BM21 787 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 TOR1BO14657 336 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 MUSKO15146 869 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 PEX11BO96011 259 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 C1SP09871 688 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 CDK4P11802 303 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 HNRNPKP61978 463 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 MMRN1Q13201 1228 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 PTK2BQ14289 1009 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 FZD2Q14332 565 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 SLC35G2Q8TBE7 412 aa26.65■■□□□ 1.86
CDKN2A-201ENST00000304494 TPRP12270 2363 aaKnown RBP26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 A0A1W2PQ67 120 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 PIAS2O75928 621 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 MMP12P39900 470 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 ARHGAP25P42331 645 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 TAS2R40P59535 323 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 YPEL5P62699 121 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 MESDQ14696 234 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 ATP13A4Q4VNC1 1196 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 CCDC157Q569K6 752 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 MARC1Q5VT66 337 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 TMPRSS7Q7RTY8 843 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 ZSWIM9Q86XI8 627 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 CPNE8Q86YQ8 564 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 SLC25A45Q8N413 288 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 NUDCD1Q96RS6 583 aa26.64■■□□□ 1.86
CDKN2A-201ENST00000304494 FRYQ5TBA9 3013 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 CFAP69A5D8W1 941 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 NEMP2A6NFY4 417 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 TMEM110-MUSTN1A8MSY1 372 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 RFPL3O75679 317 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 CSF2P04141 144 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 ALPPL2P10696 532 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 C6P13671 934 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 CKMT2P17540 419 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 IGFALSP35858 605 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 THOP1P52888 689 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 ZNF211Q13398 564 aaPredicted RBP26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 LRRC14Q15048 493 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 PAFAH1B3Q15102 231 aaKnown RBP26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 ANKRD20A8PQ5CZ79 823 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 RALGPS1Q5JS13 557 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 ZFYVE27Q5T4F4 411 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 CCNI2Q6ZMN8 369 aaPredicted RBP26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 TP53I13Q8NBR0 393 aaPredicted RBP26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 PCDH19Q8TAB3 1148 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 MGME1Q9BQP7 344 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 ANP32EQ9BTT0 268 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 SCUBE2Q9NQ36 999 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 UCKL1Q9NWZ5 548 aa26.63■■□□□ 1.85
CDKN2A-201ENST00000304494 INTUQ9ULD6 942 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms