RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CARNMT1Q8N4J0 409 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 SLC25A41Q8N5S1 370 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 TDRD5Q8NAT2 981 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 SLC22A17Q8WUG5 538 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 ALG14Q96F25 216 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 ZNF778Q96MU6 729 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 FAM111AQ96PZ2 611 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 TRIB3Q96RU7 358 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 GPR22Q99680 433 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 ELAC2Q9BQ52 826 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 CORO1BQ9BR76 489 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 FEM1AQ9BSK4 669 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 SLC46A2Q9BY10 475 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 TASP1Q9H6P5 420 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 PCMTD2Q9NV79 361 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 CFAP97Q9P2B7 532 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 SLC17A6Q9P2U8 582 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 HELZP42694 1942 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 MIA3Q5JRA6 1907 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 A0A1W2PRU2 124 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 LEFTY2O00292 366 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 CLASP2O75122 1294 aaKnown RBP12.1□□□□□ -0.47
TPM3-202ENST00000302206 XYLBO75191 536 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 VAPBO95292 243 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 PAPLNO95428 1278 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 PSMA3P25788 255 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 ARNTP27540 789 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 TYK2P29597 1187 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 ARF5P84085 180 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 CDH18Q13634 790 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 PDE1CQ14123 709 aaPredicted RBP12.1□□□□□ -0.47
TPM3-202ENST00000302206 SEPT6Q14141 434 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 FSTL4Q6MZW2 842 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 CDHR3Q6ZTQ4 885 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 ZC3HC1Q86WB0 502 aaKnown RBP12.1□□□□□ -0.47
TPM3-202ENST00000302206 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 KIAA1958Q8N8K9 716 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 ZNF557Q8N988 423 aaPredicted RBP12.1□□□□□ -0.47
TPM3-202ENST00000302206 C2CD4AQ8NCU7 369 aaPredicted RBP12.1□□□□□ -0.47
TPM3-202ENST00000302206 SHKBP1Q8TBC3 707 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 SCG3Q8WXD2 468 aaKnown RBP12.1□□□□□ -0.47
TPM3-202ENST00000302206 ACDQ96AP0 544 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 MANSC1Q9H8J5 431 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 SCUBE2Q9NQ36 999 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 MAN1C1Q9NR34 630 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 SNX15Q9NRS6 342 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 SIRPGQ9P1W8 387 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 ANKRD6Q9Y2G4 727 aa12.1□□□□□ -0.47
TPM3-202ENST00000302206 PRRC2BQ5JSZ5 2229 aaKnown RBP12.09□□□□□ -0.47
TPM3-202ENST00000302206 CBX4O00257 560 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 RFXAPO00287 272 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 LDB2O43679 373 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 MOSPD3O75425 235 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 KIAA0754O94854 1291 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 TMCC1O94876 653 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 CD160O95971 181 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 CYBBP04839 570 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 COL6A2P12110 1019 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 GLDCP23378 1020 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 MZF1P28698 734 aaPredicted RBP12.09□□□□□ -0.47
TPM3-202ENST00000302206 CSNK1DP48730 415 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 PLK1P53350 603 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 CAMK1Q14012 370 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 CNGA3Q16281 694 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 CCDC153Q494R4 210 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 RETSATQ6NUM9 610 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 NEPROQ6NW34 567 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 CLEC14AQ86T13 490 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 MFN1Q8IWA4 741 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 BBS7Q8IWZ6 715 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 FIBINQ8TAL6 211 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 ZNF398Q8TD17 642 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 BRSK1Q8TDC3 778 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 PTPRN2Q92932 1015 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 USP13Q92995 863 aaPredicted RBP12.09□□□□□ -0.47
TPM3-202ENST00000302206 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 C2orf49Q9BVC5 232 aaPredicted RBP12.09□□□□□ -0.47
TPM3-202ENST00000302206 SLC13A1Q9BZW2 595 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 MFSD1Q9H3U5 465 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 IL1RAPL1Q9NZN1 696 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 KIAA1522Q9P206 1035 aaPredicted RBP12.09□□□□□ -0.47
TPM3-202ENST00000302206 LHX3Q9UBR4 397 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 VPS28Q9UK41 221 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 ARL2BPQ9Y2Y0 163 aa12.09□□□□□ -0.47
TPM3-202ENST00000302206 MTO1Q9Y2Z2 717 aaKnown RBP12.09□□□□□ -0.47
TPM3-202ENST00000302206 MYLKQ15746 1914 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms