RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PTCD2Q8WV60 388 aaKnown RBP24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 FCRL3Q96P31 734 aaPredicted RBP24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 ACSS3Q9H6R3 686 aa24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 MRM3Q9HC36 420 aaKnown RBP24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 FBRSL1Q9HCM7 1045 aaKnown RBP24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 SAMD15Q9P1V8 674 aa24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 PRKAG3Q9UGI9 489 aa24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 PLA2G4CQ9UP65 541 aa24.83■■□□□ 1.57
GTF2A1-201ENST00000298173 TBC1D3BA6NDS4 549 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 USP1O94782 785 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 POP4O95707 220 aaKnown RBP24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 POLBP06746 335 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 ADRA1DP25100 572 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 GKP32189 559 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 SOX9P48436 509 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 IFFO1Q0D2I5 559 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 GALNT3Q14435 633 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 POU6F1Q14863 301 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 Q6ZVU0 165 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 PTPRN2Q92932 1015 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 TUBGCP5Q96RT8 1024 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 RUFY1Q96T51 708 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 HCN2Q9UL51 889 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 RPS6KL1Q9Y6S9 549 aa24.82■■□□□ 1.56
GTF2A1-201ENST00000298173 ZCWPW2A0A1B0GU75 182 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 ANKRD66B4E2M5 251 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 SOCS5O75159 536 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 PRKCHP24723 683 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 GALK1P51570 392 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 CCNHP51946 323 aaPredicted RBP24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 BCL2L1Q07817 233 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 FRG1Q14331 258 aaKnown RBP24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 CRYMQ14894 314 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 ANKRD20A4Q4UJ75 823 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 SPANXN3Q5MJ09 141 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 CCDC77Q9BR77 488 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 ADGRE3Q9BY15 652 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 FETUBQ9UGM5 382 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 STARD13Q9Y3M8 1113 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 TCAF1Q9Y4C2 921 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 FAM169AQ9Y6X4 670 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 PGLSO95336 258 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 CA4P22748 312 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 CES3Q6UWW8 571 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 PIH1D2Q8WWB5 315 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 MFSD3Q96ES6 412 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 ZNF778Q96MU6 729 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 ATP13A3Q9H7F0 1226 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 SLC8A2Q9UPR5 921 aa24.81■■□□□ 1.56
GTF2A1-201ENST00000298173 OPA1O60313 960 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 PIGNO95427 931 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 NMBRP28336 390 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 GCAP28676 217 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 ST8SIA6P61647 398 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 PTCRAQ6ISU1 281 aaPredicted RBP24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 TRMT10BQ6PF06 316 aaKnown RBP24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 CHST14Q8NCH0 376 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 TMEM245Q9H330 911 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 PCDHB9Q9Y5E1 797 aa24.8■■□□□ 1.56
GTF2A1-201ENST00000298173 MROH6A6NGR9 719 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 RASGRF2O14827 1237 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 APODP05090 189 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 STX2P32856 288 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 RPL26P61254 145 aaKnown RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 GRM3Q14832 879 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 QPCTQ16769 361 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 LONRF1Q17RB8 773 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 ARMC12Q5T9G4 340 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 SUGP1Q8IWZ8 645 aaKnown RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 RYBPQ8N488 228 aaPredicted RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 PPHLN1Q8NEY8 458 aaKnown RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 BRSK1Q8TDC3 778 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 EPS8L3Q8TE67 593 aaKnown RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 UCMAQ8WVF2 138 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 SPOCK2Q92563 424 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 RMDN1Q96DB5 314 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 ECHDC3Q96DC8 303 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 CYTH2Q99418 400 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 TMBIM4Q9HC24 238 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 TREX1Q9NSU2 369 aa24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 THAP10Q9P2Z0 257 aaPredicted RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 RPL26L1Q9UNX3 145 aaKnown RBP24.79■■□□□ 1.56
GTF2A1-201ENST00000298173 HEATR9A2RTY3 570 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 LDB2O43679 373 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 SERPINA4P29622 427 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 RAD51Q06609 339 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 ZNF234Q14588 700 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 KBTBD12Q3ZCT8 623 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 ZNF449Q6P9G9 518 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 MTERF4Q7Z6M4 381 aaKnown RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 CROCCP2Q86T23 111 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 UNC5BQ8IZJ1 945 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 LPCAT1Q8NF37 534 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 PDCD6IPQ8WUM4 868 aaKnown RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 DNASE1L2Q92874 299 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 PKNOX2Q96KN3 472 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 ZNF641Q96N77 438 aaPredicted RBP24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 P2RY13Q9BPV8 354 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 DHRS4Q9BTZ2 278 aa24.78■■□□□ 1.56
GTF2A1-201ENST00000298173 MTG2Q9H4K7 406 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms