RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PTPN18Q99952 460 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 MRPL57Q9BQC6 102 aaKnown RBP24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 TRIM8Q9BZR9 551 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 COQ10BQ9H8M1 238 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 NSMCE4AQ9NXX6 385 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 CRYL1Q9Y2S2 319 aa24.58■■□□□ 1.52
SPTSSA-201ENST00000298130 TADA2AO75478 443 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 ITGB1P05556 798 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 CCNCP24863 283 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 WNT3AP56704 352 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 MYLK3Q32MK0 819 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 OR6P1Q8NGX9 317 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 LRCH3Q96II8 777 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 HAPLN3Q96S86 360 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 ALG9Q9H6U8 611 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 VCX3AQ9NNX9 186 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 ETAA1Q9NY74 926 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 CDH9Q9ULB4 789 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 CLEC11AQ9Y240 323 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 SNX13Q9Y5W8 968 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 COMMD3-BMI1R4GMX3 469 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 UBFD1O14562 309 aaKnown RBP24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 ANXA9O76027 345 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 PIM1P11309 404 aaPredicted RBP24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 ATP5F1P24539 256 aaPredicted RBP24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 TICAM1Q8IUC6 712 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 C2CD4AQ8NCU7 369 aaPredicted RBP24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 NT5MQ9NPB1 228 aa24.57■■□□□ 1.52
SPTSSA-201ENST00000298130 UBDO15205 165 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 GPC4O75487 556 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 REP15Q6BDI9 236 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 AGMOQ6ZNB7 445 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 SETD3Q86TU7 594 aaPredicted RBP24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 CNTN4Q8IWV2 1026 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 MYO1HQ8N1T3 1032 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 ZFP28Q8NHY6 868 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 LPGAT1Q92604 370 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 TREX1Q9NSU2 369 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 MYLKQ15746 1914 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 MYADML2A6NDP7 307 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 LRRC14BA6NHZ5 514 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 SLCO1B7G3V0H7 640 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 MATN3O15232 486 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 ADRA1AP35348 466 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 COG7P83436 770 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 IHHQ14623 411 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 MGAT5BQ3V5L5 792 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 GPR158Q5T848 1215 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 KLHDC10Q6PID8 442 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 PABPC5Q96DU9 382 aaKnown RBP24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 ZNF512Q96ME7 567 aaPredicted RBP24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 PHF12Q96QT6 1004 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 IL12RB2Q99665 862 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 SLC29A1Q99808 456 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 CACNA2D2Q9NY47 1150 aa24.56■■□□□ 1.52
SPTSSA-201ENST00000298130 J3KR12 359 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 PSMD12O00232 456 aaPredicted RBP24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 CACNG3O60359 315 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 SUPT7LO94864 414 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 PCBP1Q15365 356 aaKnown RBP eCLIP24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 MTX3Q5HYI7 312 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 TECRLQ5HYJ1 363 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 ZFP1Q6P2D0 407 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 TMEM207Q6UWW9 146 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 CIB1Q99828 191 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 Q9H521 79 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 TRIM38O00635 465 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 RPL5P46777 297 aaKnown RBP24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 ARSDP51689 593 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 YBX1P67809 324 aaKnown RBP24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 PIWIL4Q7Z3Z4 852 aaKnown RBP24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 PELI3Q8N2H9 469 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 OR52K2Q8NGK3 314 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 MAELQ96JY0 434 aaKnown RBP24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 C3orf30Q96M34 536 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 TSGA13Q96PP4 275 aa24.55■■□□□ 1.52
SPTSSA-201ENST00000298130 COL6A2P12110 1019 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 CKMT2P17540 419 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 CD86P42081 329 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 LAMB3Q13751 1172 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 FAM83EQ2M2I3 478 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 ADCY4Q8NFM4 1077 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 NMUR1Q9HB89 426 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 IPO11Q9UI26 975 aaKnown RBP24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 RAB26Q9ULW5 256 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 AP4S1Q9Y587 144 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 PTCH2Q9Y6C5 1203 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 TRPC5OSA6NMA1 111 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 IRAK2O43187 625 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 ETFBP38117 255 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 RANBP10Q6VN20 620 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 NOL11Q9H8H0 719 aaKnown RBP24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 MARCH4Q9P2E8 410 aaPredicted RBP24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 NPHS1O60500 1241 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 IPO13O94829 963 aaKnown RBP24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 GEMP55040 296 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 CDKN2DP55273 166 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 TRIM25Q14258 630 aaKnown RBP24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 SCN4BQ8IWT1 228 aa24.54■■□□□ 1.52
SPTSSA-201ENST00000298130 PPWD1Q96BP3 646 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms