RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 MSLNQ13421 630 aaPredicted RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 GRM3Q14832 879 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 FASTKD1Q53R41 847 aaKnown RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 HJURPQ8NCD3 748 aaPredicted RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 PPP1R2P1Q96PQ5 205 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 VPS45Q9NRW7 570 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 TREX1Q9NSU2 369 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 LSM7Q9UK45 103 aaKnown RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 RWDD3Q9Y3V2 267 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 A0A0G2JND7 137 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 LUC7L3O95232 432 aaKnown RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 PROCP04070 461 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 RHOP08100 348 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 ALDH3A1P30838 453 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 CSE1LP55060 971 aaKnown RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 OCRLQ01968 901 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 CCDC15Q0P6D6 951 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 CYTH1Q15438 398 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 SIRPB2Q5JXA9 342 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 HTR3DQ70Z44 454 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 CCDC117Q8IWD4 279 aaPredicted RBP21.54■■□□□ 1.04
SOX17-201ENST00000297316 DDI1Q8WTU0 396 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 ZNF599Q96NL3 588 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 TRIM55Q9BYV6 548 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 RETREG1Q9H6L5 497 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 NOD2Q9HC29 1040 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 DCDC2Q9UHG0 476 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 TRIM33Q9UPN9 1127 aa21.54■■□□□ 1.04
SOX17-201ENST00000297316 IL1BP01584 269 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 DLDP09622 509 aaKnown RBP21.53■■□□□ 1.04
SOX17-201ENST00000297316 KCNA4P22459 653 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 CSKP41240 450 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 UBE3AQ05086 875 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 CTBP1Q13363 440 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 PCLAFQ15004 111 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 ZC3HC1Q86WB0 502 aaKnown RBP21.53■■□□□ 1.04
SOX17-201ENST00000297316 FAM217AQ8IXS0 508 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 TDRD5Q8NAT2 981 aaKnown RBP21.53■■□□□ 1.04
SOX17-201ENST00000297316 FEM1AQ9BSK4 669 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 HTATIP2Q9BUP3 242 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 CINPQ9BW66 212 aaPredicted RBP21.53■■□□□ 1.04
SOX17-201ENST00000297316 ARNT2Q9HBZ2 717 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 YBX2Q9Y2T7 364 aaKnown RBP21.53■■□□□ 1.04
SOX17-201ENST00000297316 HCFC2Q9Y5Z7 792 aa21.53■■□□□ 1.04
SOX17-201ENST00000297316 BIRC5O15392 142 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 AHSGP02765 367 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 ATXN1LP0C7T5 689 aaKnown RBP21.52■■□□□ 1.04
SOX17-201ENST00000297316 GALNT3Q14435 633 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 MBLAC2Q68D91 279 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 ATG14Q6ZNE5 492 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 ADGRD2Q7Z7M1 963 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 GBP7Q8N8V2 638 aaPredicted RBP21.52■■□□□ 1.04
SOX17-201ENST00000297316 SH3RF2Q8TEC5 729 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 MGME1Q9BQP7 344 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 MRM3Q9HC36 420 aaKnown RBP21.52■■□□□ 1.04
SOX17-201ENST00000297316 A0A096LPK6 155 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 FGF3P11487 239 aaPredicted RBP21.52■■□□□ 1.04
SOX17-201ENST00000297316 SCNN1BP51168 640 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 CDH18Q13634 790 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 MFSD6LQ8IWD5 586 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 CNTN4Q8IWV2 1026 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 APCDD1Q8J025 514 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 LRRC37BQ96QE4 947 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 PSKH2Q96QS6 385 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 TMEM120AQ9BXJ8 343 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 SEPT3Q9UH03 358 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 VPS28Q9UK41 221 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 OR51B4Q9Y5P0 310 aa21.52■■□□□ 1.04
SOX17-201ENST00000297316 SNNO75324 88 aaPredicted RBP21.51■■□□□ 1.03
SOX17-201ENST00000297316 TGDSO95455 350 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 C2P06681 752 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 PIRTP0C851 137 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 PTPN2P17706 415 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 SERPINH1P50454 418 aaKnown RBP21.51■■□□□ 1.03
SOX17-201ENST00000297316 CSRP3P50461 194 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 HSF5Q4G112 596 aaPredicted RBP21.51■■□□□ 1.03
SOX17-201ENST00000297316 CLEC14AQ86T13 490 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 SPNS2Q8IVW8 549 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 PNPLA1Q8N8W4 532 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 ZNF398Q8TD17 642 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 C7orf26Q96N11 449 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 GPR22Q99680 433 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 SLC39A10Q9ULF5 831 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 LOC285095A0A1B0GVY8 99 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 CCL22O00626 93 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 TIMM44O43615 452 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 ZMPSTE24O75844 475 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 MT-CO1P00395 513 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 EPHA5P54756 1037 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 GPM6BQ13491 265 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 INSCQ1MX18 579 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 GRASPQ7Z6J2 395 aaPredicted RBP21.51■■□□□ 1.03
SOX17-201ENST00000297316 MTDHQ86UE4 582 aaKnown RBP21.51■■□□□ 1.03
SOX17-201ENST00000297316 C10orf107Q8IVU9 208 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 MFN1Q8IWA4 741 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 TRIM42Q8IWZ5 723 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 CMTM8Q8IZV2 173 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 PTCD2Q8WV60 388 aaKnown RBP21.51■■□□□ 1.03
SOX17-201ENST00000297316 ALG14Q96F25 216 aa21.51■■□□□ 1.03
SOX17-201ENST00000297316 KCTD3Q9Y597 815 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms