RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GABRB3P28472 473 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SLC11A2P49281 568 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 OXCT1P55809 520 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MGAT3Q09327 533 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 BFSP2Q13515 415 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 PFKFB4Q16877 469 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MAP3K21Q5TCX8 1036 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TMEM135Q86UB9 458 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TMPRSS6Q8IU80 811 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 DDI1Q8WTU0 396 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MRGPRX2Q96LB1 330 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 C7orf26Q96N11 449 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 DDX50Q9BQ39 737 aaKnown RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 PIF1Q9H611 641 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SAR1AQ9NR31 198 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CHD5Q8TDI0 1954 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GIPC1O14908 333 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GPR39O43194 453 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SNAP91O60641 907 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GLP2RO95838 553 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 ZCCHC18P0CG32 403 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CD1EP15812 388 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 ARRB2P32121 409 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CTC1Q2NKJ3 1217 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CCDC153Q494R4 210 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CD300LGQ6UXG3 332 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TIFABQ6ZNK6 161 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 OTOP2Q7RTS6 562 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CCDC117Q8IWD4 279 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 LINC01599Q8WXQ3 324 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 IRGQQ8WZA9 623 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 INPP5DQ92835 1189 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 ISL2Q96A47 359 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 BTN2A3PQ96KV6 586 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 UROC1Q96N76 676 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 OSBPL2Q9H1P3 480 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SMOC2Q9H3U7 446 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CSNK1G1Q9HCP0 422 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 NCKIPSDQ9NZQ3 722 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TRPM5Q9NZQ8 1165 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MARCH4Q9P2E8 410 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GIMAP2Q9UG22 337 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 ZDHHC2Q9UIJ5 367 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 BPTFQ12830 3046 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TDRD15B5MCY1 1934 aaKnown RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SUPT3HB4E1H0 165 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 STX16-NPEPL1H3BU86 382 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 M0QZQ0 153 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SUPT3HO75486 399 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SIX3O95343 332 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GKP32189 559 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 HADHAP40939 763 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 LBRQ14739 615 aaKnown RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 POM121L1PQ3SYA9 428 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CMPK2Q5EBM0 449 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 FSCBQ5H9T9 825 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 LRRC73Q5JTD7 316 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 RNF219Q5W0B1 726 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SPATA24Q86W54 205 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GABPB2Q8TAK5 448 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SCG3Q8WXD2 468 aaKnown RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 DNAJC9Q8WXX5 260 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 HAPLN3Q96S86 360 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 CDRT15Q96T59 188 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 UBE2OQ9C0C9 1292 aaKnown RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 MYLKQ15746 1914 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 HEATR9A2RTY3 570 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 E5RI56 91 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ARVCFO00192 962 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 NVLO15381 856 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 PSMD3O43242 534 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 PEX11AO75192 247 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 KLHL2O95198 593 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 MPOP05164 745 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TACR2P21452 398 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 CORO1AP31146 461 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 AIF1P55008 147 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SMAD3P84022 425 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 SEMA3BQ13214 749 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 TSTA3Q13630 321 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 BTG3Q14201 252 aaPredicted RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ARMC3Q5W041 872 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 LRRC8EQ6NSJ5 796 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 LMNTD2Q8IXW0 634 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 ULK2Q8IYT8 1036 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 OR4K2Q8NGD2 314 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 RPL10LQ96L21 214 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 EIF2B3Q9NR50 452 aaKnown RBP9.36□□□□□ -0.91
PRDM9-201ENST00000296682 LNPEPQ9UIQ6 1025 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 PCDHB9Q9Y5E1 797 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 LRRC14BA6NHZ5 514 aa9.36□□□□□ -0.91
PRDM9-201ENST00000296682 BIRC5O15392 142 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms