RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 PRICKLE1Q96MT3 831 aaPredicted RBP19.22■□□□□ 0.67
SHF-201ENST00000290894 GPR78Q96P69 363 aa19.22■□□□□ 0.67
SHF-201ENST00000290894 PRKD2Q9BZL6 878 aa19.22■□□□□ 0.67
SHF-201ENST00000290894 WDR55Q9H6Y2 383 aaPredicted RBP19.22■□□□□ 0.67
SHF-201ENST00000290894 MRM3Q9HC36 420 aaKnown RBP19.22■□□□□ 0.67
SHF-201ENST00000290894 DONSONQ9NYP3 566 aa19.22■□□□□ 0.67
SHF-201ENST00000290894 MTRRQ9UBK8 725 aa19.22■□□□□ 0.67
SHF-201ENST00000290894 TAGLN3Q9UI15 199 aa19.22■□□□□ 0.67
SHF-201ENST00000290894 MICAL3Q7RTP6 2002 aa19.22■□□□□ 0.67
SHF-201ENST00000290894 LOC100653049A0A140TA62 436 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 DLX3O60479 287 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 KRT34O76011 436 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 RPSAP08865 295 aaKnown RBP19.21■□□□□ 0.67
SHF-201ENST00000290894 CD1EP15812 388 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 PGM1P36871 562 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 HADHAP40939 763 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 RGRP47804 291 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 ARL13AQ5H913 290 aaPredicted RBP19.21■□□□□ 0.67
SHF-201ENST00000290894 TMCO4Q5TGY1 634 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 ZYG11AQ6WRX3 759 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 PHTF2Q8N3S3 785 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 FAM167BQ9BTA0 163 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 KIAA0100Q14667 2235 aaKnown RBP19.21■□□□□ 0.67
SHF-201ENST00000290894 ZMPSTE24O75844 475 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 PIGNO95427 931 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 HOXD9P28356 352 aaPredicted RBP19.21■□□□□ 0.67
SHF-201ENST00000290894 GNA12Q03113 381 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 TAF12Q16514 161 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 CCDC117Q8IWD4 279 aaPredicted RBP19.21■□□□□ 0.67
SHF-201ENST00000290894 OR13C4Q8NGS5 318 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 OR52B2Q96RD2 323 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 CDH19Q9H159 772 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 CWH43Q9H720 699 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 CYP4F12Q9HCS2 524 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 ANKRD6Q9Y2G4 727 aa19.21■□□□□ 0.67
SHF-201ENST00000290894 DCXO43602 365 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 LDB2O43679 373 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 PRSS56P0CW18 603 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 HMGA1P17096 107 aaKnown RBP19.2■□□□□ 0.66
SHF-201ENST00000290894 CORO1AP31146 461 aaKnown RBP19.2■□□□□ 0.66
SHF-201ENST00000290894 PLK1P53350 603 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 HECTD3Q5T447 861 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 LIPMQ5VYY2 423 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 PIM3Q86V86 326 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 STYXQ8WUJ0 223 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 DNAJC1Q96KC8 554 aaKnown RBP19.2■□□□□ 0.66
SHF-201ENST00000290894 FAM161BQ96MY7 647 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 CYP2S1Q96SQ9 504 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 TTLL2Q9BWV7 592 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 PAK6Q9NQU5 681 aaPredicted RBP19.2■□□□□ 0.66
SHF-201ENST00000290894 TMEM233B4DJY2 109 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 SPECC1L-ADORA2AF8WAN1 911 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 JUNP05412 331 aaKnown RBP19.2■□□□□ 0.66
SHF-201ENST00000290894 SPATA31D3P0C874 917 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 MAP2K2P36507 400 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 MAPKAPK2P49137 400 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 SCNN1BP51168 640 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 SESN3P58005 492 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 CDK18Q07002 472 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 SMARCB1Q12824 385 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 SPATA31D4Q6ZUB0 917 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 SREK1Q8WXA9 508 aaKnown RBP19.2■□□□□ 0.66
SHF-201ENST00000290894 THTPAQ9BU02 230 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 RNPEPL1Q9HAU8 725 aa19.2■□□□□ 0.66
SHF-201ENST00000290894 CBX4O00257 560 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 KLHL2O95198 593 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 EPHA3P29320 983 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 TUFMP49411 452 aaKnown RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 YBEYP58557 167 aaPredicted RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 SLC25A3Q00325 362 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 FAM91A1Q658Y4 838 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 TMC7Q7Z402 723 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 CILP2Q8IUL8 1156 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 C2orf15Q8WU43 125 aaKnown RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 NUF2Q9BZD4 464 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 PDFQ9HBH1 243 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.19■□□□□ 0.66
SHF-201ENST00000290894 ZDHHC2Q9UIJ5 367 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 FIS1Q9Y3D6 152 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 A0A0U1RQS6 177 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 LOC285095A0A1B0GVY8 99 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 MROH6A6NGR9 719 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 TARM1B6A8C7 271 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 STC2O76061 302 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 CSPG5O95196 566 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 SLC11A2P49281 568 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 PTPRRQ15256 657 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 ACSBG2Q5FVE4 666 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 LINGO4Q6UY18 593 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 TXNDC5Q8NBS9 432 aaKnown RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 ANKRD49Q8WVL7 239 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 ILKAPQ9H0C8 392 aaPredicted RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 DNAJC28Q9NX36 388 aa19.19■□□□□ 0.66
SHF-201ENST00000290894 FNDC3AQ9Y2H6 1198 aaKnown RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 PRRC2BQ5JSZ5 2229 aaKnown RBP19.19■□□□□ 0.66
SHF-201ENST00000290894 ZBTB14O43829 449 aa19.18■□□□□ 0.66
SHF-201ENST00000290894 CCDC166P0CW27 439 aa19.18■□□□□ 0.66
SHF-201ENST00000290894 CCL5P13501 91 aa19.18■□□□□ 0.66
SHF-201ENST00000290894 KCNA5P22460 613 aa19.18■□□□□ 0.66
SHF-201ENST00000290894 CDKN2DP55273 166 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms