RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SMIM18P0DKX4 95 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 CPB1P15086 417 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 HMOX2P30519 316 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 GJA9P57773 515 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 STXBP5Q5T5C0 1151 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 PLPPR4Q7Z2D5 763 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 CCDC117Q8IWD4 279 aaPredicted RBP13.5□□□□□ -0.25
SCAF4-201ENST00000286835 DHRSXQ8N5I4 330 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 BLOC1S5Q8TDH9 187 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 ITFG2Q969R8 447 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 NCLNQ969V3 563 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 MAML3Q96JK9 1138 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 PLGRKTQ9HBL7 147 aa13.5□□□□□ -0.25
SCAF4-201ENST00000286835 AAR2Q9Y312 384 aaKnown RBP13.5□□□□□ -0.25
SCAF4-201ENST00000286835 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 DHRS12A0PJE2 317 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CD4P01730 458 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 NCK1P16333 377 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CES1P23141 567 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 TMED10P49755 219 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 NOMO2Q5JPE7 1267 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 POTEHQ6S545 545 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 ATG14Q6ZNE5 492 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CAMK1DQ8IU85 385 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CNTD1Q8N815 330 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 RPL10LQ96L21 214 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 UTP6Q9NYH9 597 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 LTBP3Q9NS15 1303 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 TSPAN1O60635 241 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 ZBTB17Q13105 803 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 PFKFB4Q16877 469 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 UTS2BQ765I0 119 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 DCBLD1Q8N8Z6 715 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 ZMAT2Q96NC0 199 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 TCF12Q99081 682 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 UNC93B1Q9H1C4 597 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CXorf21Q9HAI6 301 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 NT5MQ9NPB1 228 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 SELENONQ9NZV5 590 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CNOT6Q9ULM6 557 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 J3QRK9 145 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 ANXA9O76027 345 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 NPR3P17342 541 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 OCA2Q04671 838 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 TRIM16LQ309B1 348 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 SV2CQ496J9 727 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 KLHL35Q6PF15 583 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 RNF180Q86T96 592 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 ZC3HC1Q86WB0 502 aaKnown RBP13.49□□□□□ -0.25
SCAF4-201ENST00000286835 FBXL8Q96CD0 374 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 HSFY1Q96LI6 401 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 NDUFAF1Q9Y375 327 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 TRAF6Q9Y4K3 522 aa13.49□□□□□ -0.25
SCAF4-201ENST00000286835 HMBSP08397 361 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 PIRTP0C851 137 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 KCNK10P57789 538 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
SCAF4-201ENST00000286835 RBBP7Q16576 425 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 PCID2Q5JVF3 399 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 FAM219BQ5XKK7 198 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 SLC27A1Q6PCB7 646 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 CNSTQ6PJW8 725 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 TMCO5AQ8N6Q1 288 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 R3HDMLQ9H3Y0 253 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 GID8Q9NWU2 228 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 EBF1Q9UH73 591 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 NUP205Q92621 2012 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 YJEFN3A6XGL0 299 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 SYCE1LA8MT33 242 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 PTGES3LE9PB15 166 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 B3GAT3O94766 335 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 ALDH1A2O94788 518 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 CHEK2O96017 543 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 SQLEQ14534 574 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 PERM1Q5SV97 790 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 KBTBD7Q8WVZ9 684 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 ASB9Q96DX5 294 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 CDC14AQ9UNH5 594 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 GRID2O43424 1007 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 C1QAP02745 245 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 LINC00032P0C843 101 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 MTHFD1P11586 935 aaKnown RBP13.48□□□□□ -0.25
SCAF4-201ENST00000286835 NDST2P52849 883 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 INCA1Q0VD86 236 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 CBX3Q13185 183 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 FSCN1Q16658 493 aaKnown RBP13.48□□□□□ -0.25
SCAF4-201ENST00000286835 BTBD8Q5XKL5 378 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 STEAP4Q687X5 459 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 BPIFB6Q8NFQ5 453 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 TRPC4APQ8TEL6 797 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 MRPL57Q9BQC6 102 aaKnown RBP13.48□□□□□ -0.25
SCAF4-201ENST00000286835 SP110Q9HB58 689 aa13.48□□□□□ -0.25
SCAF4-201ENST00000286835 SEMA4BQ9NPR2 832 aaPredicted RBP13.48□□□□□ -0.25
SCAF4-201ENST00000286835 RIMS3Q9UJD0 308 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms