RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TECPR2O15040 1411 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 WRBO00258 174 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 HAT1O14929 419 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CD2P06729 351 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 GYS1P13807 737 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 KCNJ1P48048 391 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TUSC3Q13454 348 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FAM110CQ1W6H9 321 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 PARP6Q2NL67 630 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 BICRALQ6AI39 1079 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TPGS1Q6ZTW0 290 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DHRSXQ8N5I4 330 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DENND1AQ8TEH3 1009 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 HASPINQ8TF76 798 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DCAKDQ8WVC6 231 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 HERVK_113Q902F9 699 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 EFHD2Q96C19 240 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FAM118BQ9BPY3 351 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TMEM121Q9BTD3 319 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TAPBPLQ9BX59 468 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CDH19Q9H159 772 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 KIAA1522Q9P206 1035 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 NWD1Q149M9 1564 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ATRNO75882 1429 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3DA0A087WVF3 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3IA0A087WXS9 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3EA0A087X179 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3KA0A087X1G2 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3FA6NER0 549 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 RIIAD1A6NNX1 92 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3LB9A6J9 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 C9J4A7 227 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 KPNA4O00629 521 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FOXN1O15353 648 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 UGT2B17O75795 530 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SLC25A14O95258 325 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3HP0C7X1 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CCNYL3P0C7X3 344 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 GRB10Q13322 594 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CCNIQ14094 377 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3GQ6DHY5 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3CQ6IPX1 549 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DCLRE1AQ6PJP8 1040 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 POTEHQ6S545 545 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ADGRG6Q86SQ4 1221 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TTC7BQ86TV6 843 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D3Q8IZP1 549 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DEFB106AQ8N104 65 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TRPV1Q8NER1 839 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ATXN2LQ8WWM7 1075 aaKnown RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FAM136AQ96C01 138 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CATSPER2Q96P56 530 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TRAPPC9Q96Q05 1148 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TMEM79Q9BSE2 394 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 GPR88Q9GZN0 384 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ATXN10Q9UBB4 475 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 MGAT4AQ9UM21 535 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DNALI1O14645 258 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 PGRMC2O15173 223 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SCGB2A1O75556 95 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FARP2O94887 1054 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SNX4O95219 450 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 NR4A1P22736 598 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CDH5P33151 784 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CPA2P48052 419 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FMR1Q06787 632 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CDK18Q07002 472 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 DUSP28Q4G0W2 176 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 FAM171BQ6P995 826 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 TMPRSS11AQ6ZMR5 421 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 RFX8Q6ZV50 586 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 GPRIN3Q6ZVF9 776 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 STK32CQ86UX6 486 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 JAZF1Q86VZ6 243 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SFRP1Q8N474 314 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SH2D3CQ8N5H7 860 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 PIK3C3Q8NEB9 887 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 AP2M1Q96CW1 435 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 PGM2Q96G03 612 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 MYO19Q96H55 970 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 BTN2A3PQ96KV6 586 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 VPS35Q96QK1 796 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ADAM33Q9BZ11 813 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CELF4Q9BZC1 486 aaKnown RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SHCBP1LQ9BZQ2 653 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 GPRC5CQ9NQ84 441 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 NKIRAS2Q9NYR9 191 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 KLQ9UEF7 1012 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 ZC3H13Q5T200 1668 aaKnown RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 PLK4O00444 970 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 AKAP3O75969 853 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 VIPP01282 170 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 CYP17A1P05093 508 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 S100A9P06702 114 aaKnown RBP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SMIM10L2AP0DMW4 78 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 SMIM10L2BP0DMW5 78 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 YBX3P16989 372 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCN3A-201ENST00000283254 NDUFS1P28331 727 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 AKT2P31751 481 aa4.09□□□□□ -1.75
SCN3A-201ENST00000283254 PTPN9P43378 593 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms