RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 GABRB3P28472 473 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 SERPINB8P50452 374 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 CHI3L2Q15782 390 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 CNGA3Q16281 694 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 RABGAP1LQ5R372 815 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 KYAT3Q6YP21 454 aaKnown RBP21.15■□□□□ 0.98
YBX3-202ENST00000279550 HTR3DQ70Z44 454 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 NUDCD3Q8IVD9 361 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 MICALL1Q8N3F8 863 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 ITFG1Q8TB96 612 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 PTCD2Q8WV60 388 aaKnown RBP21.15■□□□□ 0.98
YBX3-202ENST00000279550 VPS39Q96JC1 886 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 MAGEH1Q9H213 219 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 ZNF395Q9H8N7 513 aaPredicted RBP21.15■□□□□ 0.98
YBX3-202ENST00000279550 VPS45Q9NRW7 570 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 SH3BP1Q9Y3L3 701 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 PROCP04070 461 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 BST1Q10588 318 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 GRM3Q14832 879 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 ANKRD54Q6NXT1 300 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 PLD6Q8N2A8 252 aaKnown RBP21.15■□□□□ 0.98
YBX3-202ENST00000279550 SH3RF2Q8TEC5 729 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 USP13Q92995 863 aaPredicted RBP21.15■□□□□ 0.98
YBX3-202ENST00000279550 E2F7Q96AV8 911 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 ZSWIM3Q96MP5 696 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 SEMA3CQ99985 751 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 APOL5Q9BWW9 433 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 USH1CQ9Y6N9 552 aa21.15■□□□□ 0.98
YBX3-202ENST00000279550 BIRC5O15392 142 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 IL1BP01584 269 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 ATXN1LP0C7T5 689 aaKnown RBP21.14■□□□□ 0.97
YBX3-202ENST00000279550 SERPINH1P50454 418 aaKnown RBP21.14■□□□□ 0.97
YBX3-202ENST00000279550 MPP1Q00013 466 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 IRF9Q00978 393 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 CBX2Q14781 532 aaPredicted RBP21.14■□□□□ 0.97
YBX3-202ENST00000279550 SIRPB2Q5JXA9 342 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 FYB2Q5VWT5 728 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 SYCE2Q6PIF2 218 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 GPR149Q86SP6 731 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 ZC3HC1Q86WB0 502 aaKnown RBP21.14■□□□□ 0.97
YBX3-202ENST00000279550 DENND6AQ8IWF6 608 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 CNTN4Q8IWV2 1026 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 SPON2Q9BUD6 331 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 TMEM216Q9P0N5 145 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 DCDC2Q9UHG0 476 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 CHKBQ9Y259 395 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 ZNF510Q9Y2H8 683 aa21.14■□□□□ 0.97
YBX3-202ENST00000279550 TIMM44O43615 452 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 PRAMEF12O95522 483 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 GSTA1P08263 222 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 PGGT1BP53609 377 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 ADAM15Q13444 863 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 ZNF235Q14590 738 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 GRIN2CQ14957 1233 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 IL31Q6EBC2 164 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 KIAA0930Q6ICG6 404 aaPredicted RBP21.13■□□□□ 0.97
YBX3-202ENST00000279550 FAM217AQ8IXS0 508 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 NSMCE3Q96MG7 304 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 ZNF599Q96NL3 588 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 RETREG1Q9H6L5 497 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 DCTN4Q9UJW0 460 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 XIRP2A4UGR9 3374 aa21.13■□□□□ 0.97
YBX3-202ENST00000279550 LOC285095A0A1B0GVY8 99 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 SIN3BO75182 1162 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 CLDN11O75508 207 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 AHSGP02765 367 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 RHOCP08134 193 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 TROVE2P10155 538 aaKnown RBP eCLIP21.12■□□□□ 0.97
YBX3-202ENST00000279550 HOXB8P17481 243 aaPredicted RBP21.12■□□□□ 0.97
YBX3-202ENST00000279550 ALDH3A1P30838 453 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 CSRP3P50461 194 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 TMPRSS15P98073 1019 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 CTBP1Q13363 440 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 INSCQ1MX18 579 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 FASTKD1Q53R41 847 aaKnown RBP21.12■□□□□ 0.97
YBX3-202ENST00000279550 ZCCHC23Q6ZST2 131 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 CHST9Q7L1S5 443 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 CLEC14AQ86T13 490 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 TRIM42Q8IWZ5 723 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 BBS7Q8IWZ6 715 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 RANBP9Q96S59 729 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 GPR22Q99680 433 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 POLR1EQ9GZS1 481 aaKnown RBP21.12■□□□□ 0.97
YBX3-202ENST00000279550 MYLK2Q9H1R3 596 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 RHOJQ9H4E5 214 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 NSMCE4AQ9NXX6 385 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 SLC39A10Q9ULF5 831 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 HELZP42694 1942 aaKnown RBP21.12■□□□□ 0.97
YBX3-202ENST00000279550 C2orf16Q68DN1 1984 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 A0A096LPK6 155 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 GFRA2O00451 464 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 KDELR3O43731 214 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 RGRP47804 291 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 OXCT1P55809 520 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 OCRLQ01968 901 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 BNIP1Q12981 228 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 PCLAFQ15004 111 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 TSTD2Q5T7W7 516 aa21.12■□□□□ 0.97
YBX3-202ENST00000279550 ARID3BQ8IVW6 561 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms