RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 NFKBIAP25963 317 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 CD86P42081 329 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 CSNK1DP48730 415 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 CSNK1EP49674 416 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 CCR5P51681 352 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 AFF3P51826 1226 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 EIF3EP60228 445 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 POLR2LP62875 67 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 RPS21P63220 83 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 ADCY2Q08462 1091 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 NSUN2Q08J23 767 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD44-204ENST00000279452 ELP6Q0PNE2 266 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 CCDC173Q0VFZ6 552 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 GRIK2Q13002 908 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 PCSK7Q16549 785 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 UGP2Q16851 508 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 PLA2G2CQ5R387 149 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 ARMC12Q5T9G4 340 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 NAPEPLDQ6IQ20 393 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 DARS2Q6PI48 645 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 BBS12Q6ZW61 710 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 KDELC2Q7Z4H8 507 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 PTAR1Q7Z6K3 402 aaPredicted RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 TRIM69Q86WT6 500 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 HORMAD1Q86X24 394 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 CDKL3Q8IVW4 592 aaPredicted RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 NDUFAF2Q8N183 169 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 LPCAT1Q8NF37 534 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 TRIM58Q8NG06 486 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 OR2I1PQ8NGU4 316 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 RAB7BQ96AH8 199 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 FEM1CQ96JP0 617 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 OLFM3Q96PB7 478 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 TSGA13Q96PP4 275 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 BRD8Q9H0E9 1235 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 KCNF1Q9H3M0 494 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 C10orf88Q9H8K7 445 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 PCDH12Q9NPG4 1184 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 TMEM9BQ9NQ34 198 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 RXFP3Q9NSD7 469 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 GOLGA6AQ9NYA3 693 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 DKK3Q9UBP4 350 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 TPX2Q9ULW0 747 aaKnown RBP6.59□□□□□ -1.35
CD44-204ENST00000279452 CA5BQ9Y2D0 317 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 ATP8A1Q9Y2Q0 1164 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 PCDHB9Q9Y5E1 797 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 RAI2Q9Y5P3 530 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 FADS3Q9Y5Q0 445 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 SLCO1B1Q9Y6L6 691 aa6.59□□□□□ -1.35
CD44-204ENST00000279452 CKAP5Q14008 2032 aa6.59□□□□□ -1.36
CD44-204ENST00000279452 IGLON5A6NGN9 336 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 C4orf47A7E2U8 309 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 HACD1B0YJ81 288 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 PRAMEF26H0Y7S4 382 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ARHGAP33O14559 1287 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 FPGTO14772 594 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 KCNN4O15554 427 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 MTSS1O43312 755 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 AP1G1O43747 822 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 KIF5CO60282 957 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 SOCS5O75159 536 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 TM7SF2O76062 418 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 PAK4O96013 591 aaPredicted RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 PCCBP05166 539 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ELFN1P0C7U0 828 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 RBP3P10745 1247 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CYP2A6P11509 494 aaPredicted RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 C6P13671 934 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 TIMP2P16035 220 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CTPS1P17812 591 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 NFKB1P19838 968 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 HNRNPA2B1P22626 353 aaKnown RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 MSNP26038 577 aaKnown RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 PTPN3P26045 913 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CD38P28907 300 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 GRIA4P48058 902 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 PEX5P50542 639 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CLDN2P57739 230 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 IFI35P80217 286 aaPredicted RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 ARHGAP8P85298 464 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 IL9RQ01113 521 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 TRAF2Q12933 501 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ARHGEF7Q14155 803 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 GALNT3Q14435 633 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ACOX1Q15067 660 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 PRKD1Q15139 912 aaPredicted RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 NOMO1Q15155 1222 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 TAZQ16635 292 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 RSPO4Q2I0M5 234 aaPredicted RBP6.58□□□□□ -1.36
CD44-204ENST00000279452 ZNF284Q2VY69 593 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 RALGPS1Q5JS13 557 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ZNF569Q5MCW4 686 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 CCDC70Q6NSX1 233 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 NEK5Q6P3R8 708 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 SLC23A3Q6PIS1 610 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 USP45Q70EL2 814 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 PID1Q7Z2X4 250 aa6.58□□□□□ -1.36
CD44-204ENST00000279452 ZSWIM9Q86XI8 627 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms