RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 PCOLCE2Q9UKZ9 415 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 COQ6Q9Y2Z9 468 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 PCDHGB2Q9Y5G2 931 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 FPGTO14772 594 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 DFNA5O60443 496 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 SDC3O75056 442 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 NEBLO76041 1014 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 TM7SF2O76062 418 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 EPHA8P29322 1005 aaPredicted RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 HSPA9P38646 679 aaKnown RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 DYNLT1P63172 113 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ITKQ08881 620 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 NSUN2Q08J23 767 aaKnown RBP eCLIP13.73□□□□□ -0.21
CT55-201ENST00000276241 OVGP1Q12889 678 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 TCEAL1Q15170 157 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 SHBQ15464 509 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 TRIP6Q15654 476 aaKnown RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 TIGD7Q6NT04 549 aaPredicted RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 RAD9BQ6WBX8 426 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ZSCAN30Q86W11 494 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 RFX6Q8HWS3 928 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 CCNYQ8ND76 341 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ACRBPQ8NEB7 543 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 NSMCE3Q96MG7 304 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ZNF830Q96NB3 372 aaPredicted RBP13.73□□□□□ -0.21
CT55-201ENST00000276241 RNF157Q96PX1 679 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 MGME1Q9BQP7 344 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 ATP8A1Q9Y2Q0 1164 aa13.73□□□□□ -0.21
CT55-201ENST00000276241 SPTBN4Q9H254 2564 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 POM121BA6NF01 834 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 APOL1O14791 398 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 PCDHGA12O60330 932 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 ITGAVP06756 1048 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 C6P13671 934 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 FECHP22830 423 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 CDC25BP30305 580 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 MMP12P39900 470 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 PI4KAP42356 2102 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 GRK6P43250 576 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 INAVAQ3KP66 663 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 LRRC38Q5VT99 294 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 KYAT3Q6YP21 454 aaKnown RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 Q6ZSR6 202 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 ABI3BPQ7Z7G0 1075 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 SLC22A18ASQ8N1D0 253 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 OXR1Q8N573 874 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 PLD5Q8N7P1 536 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 HCAR2Q8TDS4 363 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 NUDCD1Q96RS6 583 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 BAG1Q99933 345 aaPredicted RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 C1QTNF2Q9BXJ5 285 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 MAK16Q9BXY0 300 aaKnown RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 DTLQ9NZJ0 730 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 PCDHGC4Q9Y5F7 938 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 HEY1Q9Y5J3 304 aa13.72□□□□□ -0.21
CT55-201ENST00000276241 EPN1Q9Y6I3 576 aaPredicted RBP13.72□□□□□ -0.21
CT55-201ENST00000276241 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 RCCD1A6NED2 376 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 A8MX80 341 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 TRAFD1O14545 582 aaPredicted RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 YKT6O15498 198 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 PSTPIP1O43586 416 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 CBFA2T3O75081 653 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 CPP00450 1065 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 CR2P20023 1033 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 MX2P20592 715 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 PMLP29590 882 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 IGFALSP35858 605 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 SUOXP51687 545 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 HADHBP55084 474 aaKnown RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 SLC10A2Q12908 348 aaPredicted RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 BNIP3Q12983 259 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 PDE1CQ14123 709 aaPredicted RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 LLGL1Q15334 1064 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 TMEM52BQ4KMG9 183 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 MFSD7Q6UXD7 560 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 NPNTQ6UXI9 565 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 DAAM2Q86T65 1068 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 LRRC49Q8IUZ0 686 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 DENND6BQ8NEG7 585 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 ECHDC3Q96DC8 303 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 BMFQ96LC9 184 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 KLF6Q99612 283 aaPredicted RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 C1QTNF7Q9BXJ2 289 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 POLR1EQ9GZS1 481 aaKnown RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 REXO2Q9Y3B8 237 aaKnown RBP13.71□□□□□ -0.22
CT55-201ENST00000276241 ALG6Q9Y672 507 aa13.71□□□□□ -0.22
CT55-201ENST00000276241 GOLGA6L6A8MZA4 724 aa13.7□□□□□ -0.22
CT55-201ENST00000276241 ZNF487B1APH4 448 aa13.7□□□□□ -0.22
CT55-201ENST00000276241 MATN3O15232 486 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms