RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 HHATQ5VTY9 493 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ARMC3Q5W041 872 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 C6orf89Q6UWU4 347 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 TMEM25Q86YD3 366 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 C12orf76Q8N812 135 aaPredicted RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 ITFG1Q8TB96 612 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ZNF75CPQ92670 426 aaPredicted RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 LRRC3BQ96PB8 259 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ZDHHC7Q9NXF8 308 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SCN8AQ9UQD0 1980 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 PAPSS2O95340 614 aaPredicted RBP12.21□□□□□ -0.45
SDE2-201ENST00000272091 FGF1P05230 155 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 ACVR1Q04771 509 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 GRM3Q14832 879 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 INO80DQ53TQ3 878 aaPredicted RBP12.21□□□□□ -0.45
SDE2-201ENST00000272091 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 C2CD4AQ8NCU7 369 aaPredicted RBP12.21□□□□□ -0.45
SDE2-201ENST00000272091 VPS39Q96JC1 886 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 PBX4Q9BYU1 374 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 LINC00597Q9H2U6 94 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 TDP1Q9NUW8 608 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 PCDHGC4Q9Y5F7 938 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 COL4A3Q01955 1670 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 NDST3O95803 873 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 AVPR1AP37288 418 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 ZNF789Q5FWF6 425 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 ATXN7L2Q5T6C5 722 aaPredicted RBP12.21□□□□□ -0.45
SDE2-201ENST00000272091 ACMSDQ8TDX5 336 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 IFT43Q96FT9 208 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 SAMD11Q96NU1 681 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 GPR22Q99680 433 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 ELAC2Q9BQ52 826 aaKnown RBP12.21□□□□□ -0.45
SDE2-201ENST00000272091 MECRQ9BV79 373 aa12.21□□□□□ -0.45
SDE2-201ENST00000272091 TYW5A2RUC4 315 aaKnown RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 CTSOP43234 321 aaPredicted RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 IRF9Q00978 393 aa12.21□□□□□ -0.46
SDE2-201ENST00000272091 CBX2Q14781 532 aaPredicted RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 PDE12Q6L8Q7 609 aaKnown RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 BBS5Q8N3I7 341 aa12.21□□□□□ -0.46
SDE2-201ENST00000272091 KIF26AQ9ULI4 1882 aaPredicted RBP12.21□□□□□ -0.46
SDE2-201ENST00000272091 OR51F1A6NGY5 319 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 BUD23O43709 281 aaKnown RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 XYLBO75191 536 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 HLA-FP30511 346 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 FUT11Q495W5 492 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 FAM47EQ6ZV65 393 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 CLEC14AQ86T13 490 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 PLD6Q8N2A8 252 aaKnown RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 MDGA1Q8NFP4 955 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 GDPD5Q8WTR4 605 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 RSPRY1Q96DX4 576 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 VPS11Q9H270 941 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 NKX2-4Q9H2Z4 354 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 ZNF358Q9NW07 568 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 RAI2Q9Y5P3 530 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 SNX3O60493 162 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 SERPINB4P48594 390 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 PLEKHG6Q3KR16 790 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 C16orf46Q6P387 395 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 MARCH4Q9P2E8 410 aaPredicted RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 FZD6O60353 706 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 PLK1P53350 603 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 NSUN2Q08J23 767 aaKnown RBP eCLIP12.2□□□□□ -0.46
SDE2-201ENST00000272091 ARHGAP15Q53QZ3 475 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 ZNF470Q6ECI4 717 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 LEMD2Q8NC56 503 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 BLOC1S5Q8TDH9 187 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 DNAJC1Q96KC8 554 aaKnown RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 RHOJQ9H4E5 214 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 ZNF106Q9H2Y7 1883 aaKnown RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 SOBPA7XYQ1 873 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 EDF1O60869 148 aaKnown RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 TCF3P15923 654 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 ZNF140P52738 457 aaPredicted RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 PDE1BQ01064 536 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 DUSP6Q16828 381 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 OR13C4Q8NGS5 318 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 SUDS3Q9H7L9 328 aaPredicted RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 ABCB8Q9NUT2 735 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■□□ 17.8
SDE2-201ENST00000272091 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
SDE2-201ENST00000272091 TXNDC16Q9P2K2 825 aa12.2□□□□□ -0.46
SDE2-201ENST00000272091 A0A0U1RQS6 177 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 HAUS5O94927 633 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 BGNP21810 368 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 SERPINB8P50452 374 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 SEMA3AQ14563 771 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 BRSK1Q8TDC3 778 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 HDAC10Q969S8 669 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 C1QTNF1Q9BXJ1 281 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 CDH22Q9UJ99 828 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 PSMA3P25788 255 aa12.19□□□□□ -0.46
SDE2-201ENST00000272091 NRIP1P48552 1158 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms