RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ASB12Q8WXK4 309 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 VCPIP1Q96JH7 1222 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 FEM1CQ96JP0 617 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 SLC46A1Q96NT5 459 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 DEPDC7Q96QD5 511 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 LGMNQ99538 433 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 DUSP23Q9BVJ7 150 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 LHX3Q9UBR4 397 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 SIK3Q9Y2K2 1263 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 COQ6Q9Y2Z9 468 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 CSNK1G3Q9Y6M4 447 aa9.07□□□□□ -0.96
TPM3-201ENST00000271850 CPED1A4D0V7 1026 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 KRIT1O00522 736 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 NTN3O00634 580 aaPredicted RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 FPGTO14772 594 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 MUSKO15146 869 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 EFSO43281 561 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 CCP110O43303 1012 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 TSPAN6O43657 245 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 KDELR3O43731 214 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PIGNO95427 931 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PLEKP08567 350 aaPredicted RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 ALPPL2P10696 532 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 TSHRP16473 764 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 GM2AP17900 193 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 RGRP47804 291 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 ADKP55263 362 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 ERVPABLB-1P60509 514 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 OGDHQ02218 1023 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 SRSF6Q13247 344 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 IRF4Q15306 451 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 KRT31Q15323 416 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 CYTH1Q15438 398 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 TCEA2Q15560 299 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PRRT3Q5FWE3 981 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 ARHGAP40Q5TG30 622 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 RWDD4Q6NW29 188 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 WDR59Q6PJI9 974 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 MON1BQ7L1V2 547 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 STRADAQ7RTN6 431 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 APTXQ7Z2E3 356 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 VPS36Q86VN1 386 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PHACTR4Q8IZ21 702 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 LSM14AQ8ND56 463 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 FAM174AQ8TBP5 190 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 NTAN1Q96AB6 310 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 RAB7BQ96AH8 199 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 TBC1D31Q96DN5 1066 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 HMCESQ96FZ2 354 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 EXOC2Q96KP1 924 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 MAGEH1Q9H213 219 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PDCL3Q9H2J4 239 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PDFQ9HBH1 243 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 USP29Q9HBJ7 922 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 APOBEC3BQ9UH17 382 aaKnown RBP9.06□□□□□ -0.96
TPM3-201ENST00000271850 SALL4Q9UJQ4 1053 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 PAXBP1Q9Y5B6 917 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 RELNP78509 3460 aa9.06□□□□□ -0.96
TPM3-201ENST00000271850 MYO18BQ8IUG5 2567 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 SCN8AQ9UQD0 1980 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 A0A1W2PQM1 296 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 TSPAN11A1L157 253 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 NEMP2A6NFY4 417 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 EIF4E1BA6NMX2 242 aaKnown RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 LMO7DNF2Z398 122 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 PYCARD-AS1I3L0S3 204 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 ERVH48-1M5A8F1 160 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 TPP1O14773 563 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 YY2O15391 372 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 BUB1BO60566 1050 aaPredicted RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 RAMP2O60895 175 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 PRKCGP05129 697 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 SDC4P31431 198 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 SOX5P35711 763 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 EIF4A3P38919 411 aaKnown RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 POLR2FP61218 127 aaKnown RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 RPL7AP62424 266 aaKnown RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 CFHR1Q03591 330 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 CCDC15Q0P6D6 951 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 CLN3Q13286 438 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 LY6DQ14210 128 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 POLD3Q15054 466 aaPredicted RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 TPD52L1Q16890 204 aaPredicted RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 CLEC16AQ2KHT3 1053 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 ALG11Q2TAA5 492 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 KLHL40Q2TBA0 621 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 WSCD2Q2TBF2 565 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 TMEM52BQ4KMG9 183 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 GDPD4Q6W3E5 623 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 MACC1Q6ZN28 852 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 ZNF677Q86XU0 584 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 DNAAF5Q86Y56 855 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 FAM114A1Q8IWE2 563 aa9.05□□□□□ -0.96
TPM3-201ENST00000271850 RYBPQ8N488 228 aaPredicted RBP9.05□□□□□ -0.96
TPM3-201ENST00000271850 ARFGAP1Q8N6T3 406 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms