RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 LMCD1Q9NZU5 365 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 TIPRLO75663 272 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 OR6B1O95007 311 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 SLC2A3P11169 496 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 GM2AP17900 193 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 TKTL1P51854 596 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 HK2P52789 917 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 NRLP54845 237 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 KLF1Q13351 362 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 SCARA3Q6AZY7 606 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 ZNF470Q6ECI4 717 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 LRRC8DQ7L1W4 858 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 OMDQ99983 421 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 ARHGAP39Q9C0H5 1083 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 RAD21L1Q9H4I0 556 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 PCDH18Q9HCL0 1135 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 VPS45Q9NRW7 570 aa11.62□□□□□ -0.55
CLSTN3-201ENST00000266546 SNAP91O60641 907 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 UGT1A9O60656 530 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 NDUFS3O75489 264 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 SCNN1AP37088 669 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ETFBP38117 255 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 HPCAP84074 193 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 DMC1Q14565 340 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ZNF235Q14590 738 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 PPP1R26Q5T8A7 1209 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 CRYBG2Q8N1P7 616 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 UBR7Q8N806 425 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ZNF781Q8N8C0 355 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 DUSP16Q9BY84 665 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 NOL6Q9H6R4 1146 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 CAB39LQ9H9S4 337 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 UGT1A7Q9HAW7 530 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 UGT1A10Q9HAW8 530 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 UGT1A8Q9HAW9 530 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 TMEM216Q9P0N5 145 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 A0A0U1RQF3 1178 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 MATN2O00339 956 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ZNF623O75123 536 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 PSMB9P28065 219 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 NOS2P35228 1153 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 SLC7A2P52569 658 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 DMPKQ09013 629 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 MTA1Q13330 715 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 MSLNQ13421 630 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 SQLEQ14534 574 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 NANOGNBQ7Z5D8 188 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 PSTKQ8IV42 348 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 MIER2Q8N344 545 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FICDQ9BVA6 458 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 SDCBP2Q9H190 292 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 EPS8L2Q9H6S3 715 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 SYBUQ9NX95 663 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ZNF646O15015 1829 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 COL11A1P12107 1806 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 DHRS12A0PJE2 317 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FKBP9O95302 570 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 H6PDO95479 791 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 TPSB2P20231 275 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 HOXA11P31270 313 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 LSAMPQ13449 338 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 TPSAB1Q15661 275 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 EML3Q32P44 896 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 CTXN3Q4LDR2 81 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ATP6AP1LQ52LC2 224 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 BROXQ5VW32 411 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 TMC5Q6UXY8 1006 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FKBP9P1Q75LS8 142 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 HEATR4Q86WZ0 1026 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 DEFB106AQ8N104 65 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ADAM32Q8TC27 787 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 RORBQ92753 470 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FAM136AQ96C01 138 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 SENP6Q9GZR1 1112 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FBXO44Q9H4M3 255 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 PARVBQ9HBI1 364 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 TMEM39AQ9NV64 488 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 TRNAU1APQ9NX07 287 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 EURLQ9NYK6 297 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 CD274Q9NZQ7 290 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 XPR1Q9UBH6 696 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 ANAPC2Q9UJX6 822 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 PCDHB5Q9Y5E4 795 aa11.61□□□□□ -0.55
CLSTN3-201ENST00000266546 FAM95CA0A1B0GW59 222 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 TFEBP19484 476 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 SLC5A3P53794 718 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 CSE1LP55060 971 aaKnown RBP11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 IL5RAQ01344 420 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 TSTA3Q13630 321 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 ZIK1Q3SY52 487 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 KBTBD2Q8IY47 623 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 FAM156AQ8NDB6 213 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 LPPQ93052 612 aa11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 PRR11Q96HE9 360 aaPredicted RBP11.6□□□□□ -0.55
CLSTN3-201ENST00000266546 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms