RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 OXCT2Q9BYC2 517 aaPredicted RBP15.51■□□□□ 0.07
TIMP3-201ENST00000266085 RAP2CQ9Y3L5 183 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 SNX10Q9Y5X0 201 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 SNX8Q9Y5X2 465 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 QSOX1O00391 747 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 ACSL4O60488 711 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 GNRH1P01148 92 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 NEK3P51956 506 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 ATP6V0D1P61421 351 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 PWP1Q13610 501 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 ASTE1Q2TB18 679 aaPredicted RBP15.51■□□□□ 0.07
TIMP3-201ENST00000266085 SPATA6LQ8N4H0 392 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 SPPL2AQ8TCT8 520 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 OSCP1Q8WVF1 389 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 CERS4Q9HA82 394 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 ZNF510Q9Y2H8 683 aa15.51■□□□□ 0.07
TIMP3-201ENST00000266085 CD3EAPO15446 510 aaKnown RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 UNC5CO95185 931 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 GABRB2P47870 512 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 NAA20P61599 178 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 ALDH6A1Q02252 535 aaKnown RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SH3PXD2AQ5TCZ1 1133 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 ZFP1Q6P2D0 407 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 CYP2R1Q6VVX0 501 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 RDH11Q8TC12 318 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SLC44A1Q8WWI5 657 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 KRT87PA6NCN2 255 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 KCNU1A8MYU2 1149 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 RASSF9O75901 435 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 C2P06681 752 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 CCND3P30281 292 aaPredicted RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 RNF43Q68DV7 783 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 ZNF438Q7Z4V0 828 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 YTHDF3Q7Z739 585 aaKnown RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 C11orf74Q86VG3 221 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 CPNE8Q86YQ8 564 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 RASAL3Q86YV0 1011 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SYT12Q8IV01 421 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 PLEKHO2Q8TD55 490 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 STARD8Q92502 1023 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 B3GALT6Q96L58 329 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SLC9A7Q96T83 725 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 KLHL28Q9NXS3 571 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 C5orf60A6NFR6 353 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 PEX11AO75192 247 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SLC16A1P53985 500 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 TCEA2Q15560 299 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 MPPE1Q53F39 396 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 LIPMQ5VYY2 423 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 IYDQ6PHW0 289 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 OR7D4Q8NG98 312 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 FUBP3Q96I24 572 aaKnown RBP eCLIP15.5■□□□□ 0.078e-7■■■■■ 34.7
TIMP3-201ENST00000266085 NDUFA13Q9P0J0 144 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 DEC1Q9P2X7 70 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 LIMD1Q9UGP4 676 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SAC3D1A6NKF1 404 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 ZNF839A8K0R7 811 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 NRP1O14786 923 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 ULK1O75385 1050 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 LDLRP01130 860 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 HPGDP15428 266 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 DRD4P21917 467 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 OTUD3Q5T2D3 398 aaPredicted RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 MFSD5Q6N075 450 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 FUKQ8N0W3 1084 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 ARL14EPQ8N8R7 260 aaPredicted RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 C12orf50Q8NA57 414 aaPredicted RBP15.5■□□□□ 0.07
TIMP3-201ENST00000266085 PCDH19Q8TAB3 1148 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 PHF21AQ96BD5 680 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 MCRS1Q96EZ8 462 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 QKIQ96PU8 341 aaKnown RBP eCLIP15.5■□□□□ 0.075e-8■■■■■ 28.6
TIMP3-201ENST00000266085 SEZ6LQ9BYH1 1024 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 TMCO1Q9UM00 188 aa15.5■□□□□ 0.07
TIMP3-201ENST00000266085 SNTNA6NMZ2 147 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 MAN1A2O60476 641 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 SNUPNO95149 360 aaKnown RBP15.49■□□□□ 0.07
TIMP3-201ENST00000266085 ATG7O95352 703 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 LRPAP1P30533 357 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 PRKCQQ04759 706 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 CDCA2Q69YH5 1023 aaPredicted RBP15.49■□□□□ 0.07
TIMP3-201ENST00000266085 SLC30A9Q6PML9 568 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 LINGO4Q6UY18 593 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 C7orf61Q8IZ16 206 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 KRT78Q8N1N4 520 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 TBC1D14Q9P2M4 693 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 GGA2Q9UJY4 613 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 ADH1CP00326 375 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 TSPAN8P19075 237 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 ADRM1Q16186 407 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 FAM151BQ6UXP7 276 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 ZNF621Q6ZSS3 439 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 TMEM132CQ8N3T6 1108 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 PCDH20Q8N6Y1 951 aaKnown RBP15.49■□□□□ 0.07
TIMP3-201ENST00000266085 ZNF229Q9UJW7 825 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 MC4RP32245 332 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 MAPK9P45984 424 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 PKNOX1P55347 436 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 GNA12Q03113 381 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 DEPDC1Q5TB30 811 aa15.49■□□□□ 0.07
TIMP3-201ENST00000266085 RHBDF2Q6PJF5 856 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms