RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CLDND1Q9NY35 253 aa14.57□□□□□ -0.08
PDLIM2-201ENST00000265810 RABGEF1Q9UJ41 708 aa14.57□□□□□ -0.08
PDLIM2-201ENST00000265810 ARIH1Q9Y4X5 557 aaPredicted RBP14.57□□□□□ -0.08
PDLIM2-201ENST00000265810 WNT6Q9Y6F9 365 aa14.57□□□□□ -0.08
PDLIM2-201ENST00000265810 GSTA4O15217 222 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 H2AFYO75367 372 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 MT-CO1P00395 513 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CA3P07451 260 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CPA2P48052 419 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 IL2P60568 153 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 FAM189BP81408 668 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CAP1Q01518 475 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 HSPA14Q0VDF9 509 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 MUM1Q2TAK8 710 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 PKDCCQ504Y2 493 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 ANKS1BQ7Z6G8 1248 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 SETD3Q86TU7 594 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 PRPF39Q86UA1 669 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 FBXO39Q8N4B4 442 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 L3MBTL1Q9Y468 752 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 TCAF1Q9Y4C2 921 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 PRPF4O43172 522 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 ADAM12O43184 909 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 USP1O94782 785 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 KLHL2O95198 593 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 OLIG2Q13516 323 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 DDX39BQ13838 428 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 SEL1L3Q68CR1 1132 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 SLC22A9Q8IVM8 553 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 OR8D1Q8WZ84 308 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CCDC124Q96CT7 223 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 TUBGCP3Q96CW5 907 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 C1orf74Q96LT6 269 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 FBXL21Q9UKT6 434 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 H0Y3Z8 333 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 MYO1CO00159 1063 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 FSHRP23945 695 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 RAB10P61026 200 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 FAM45BPQ6NSW5 357 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 RD3Q7Z3Z2 195 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 TNS4Q8IZW8 715 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 FAM45AQ8TCE6 357 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 RSRC1Q96IZ7 334 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 RHOJQ9H4E5 214 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CACYBPQ9HB71 228 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CASS4Q9NQ75 786 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 TRPC5OSA6NMA1 111 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 RHOP08100 348 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CDK7P50613 346 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 NAGLUP54802 743 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 RING1Q06587 406 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 SRLQ86TD4 932 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 CKAP2Q8WWK9 683 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 IGSF8Q969P0 613 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 ACDQ96AP0 544 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 ZCCHC2Q9C0B9 1178 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 THAP1Q9NVV9 213 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 VWA7Q9Y334 891 aa14.56□□□□□ -0.08
PDLIM2-201ENST00000265810 A0A0D9SEW6 157 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ZNF487B1APH4 448 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 LTA4HP09960 611 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ERFP50548 548 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 MAPRE2Q15555 327 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 DLG2Q15700 870 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 C1orf146Q5VVC0 180 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ANKRD33Q7Z3H0 272 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 TRAPPC5Q8IUR0 188 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 CXorf40AQ8TE69 158 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 TMEM248Q9NWD8 314 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 SOX13Q9UN79 622 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 NCKAP1Q9Y2A7 1128 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 A0A087X1B8 175 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 LEFTY2O00292 366 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 EPHX1P07099 455 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 AP1S1P61966 158 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ACMSDQ8TDX5 336 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 RIPOR3Q96MK2 946 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 TMEM120AQ9BXJ8 343 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ABCG8Q9H221 673 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 SIPA1L1O43166 1804 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 AIM2O14862 343 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 RPP40O75818 363 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 C2P06681 752 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 PABPC1P11940 636 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 ALADP13716 330 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 MZF1P28698 734 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 KCNJ11Q14654 390 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 SIX1Q15475 284 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 PIK3R6Q5UE93 754 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 SNX30Q5VWJ9 437 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 TP53INP2Q8IXH6 220 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 OR52K2Q8NGK3 314 aa14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 CENPIQ92674 756 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-201ENST00000265810 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms