RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 WDR27A2RRH5 827 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 HACD1B0YJ81 288 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 JUNBP17275 347 aaPredicted RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 PGAM1P18669 254 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 TFE3P19532 575 aaPredicted RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 EEF1B2P24534 225 aaKnown RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 PTPN9P43378 593 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 LEPRP48357 1165 aaKnown RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 PRKAA2P54646 552 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 Q3C1V9 767 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 OR6B2Q6IFH4 312 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 ZNF773Q6PK81 442 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 LBX2Q6XYB7 198 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 PIWIL3Q7Z3Z3 882 aaKnown RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 HEATR4Q86WZ0 1026 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 DHFR2Q86XF0 187 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 ANKK1Q8NFD2 765 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 PCDH19Q8TAB3 1148 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 S100ZQ8WXG8 99 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 C9orf16Q9BUW7 83 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 RNF38Q9H0F5 515 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 MARCH7Q9H992 704 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 RPF1Q9H9Y2 349 aaKnown RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 MID2Q9UJV3 735 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.22□□□□□ -0.29
NUP54-201ENST00000264883 UGT2B4P06133 528 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 BMPR1AP36894 532 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 GRIA1P42261 906 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 SPCS2Q15005 226 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 GLRA4Q5JXX5 417 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 C6orf10Q5SRN2 563 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 CCNYL2Q5T2Q4 361 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 LCLAT1Q6UWP7 414 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 TAS2R42Q7RTR8 314 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 SIX5Q8N196 739 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 OR2T34Q8NGX1 318 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 OR2T3Q8NH03 318 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 TRIB2Q92519 343 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 MOCOSQ96EN8 888 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 LHPPQ9H008 270 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 ATP13A3Q9H7F0 1226 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 PTPRHQ9HD43 1115 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 ACSS2Q9NR19 701 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 TXNDC16Q9P2K2 825 aa13.22□□□□□ -0.29
NUP54-201ENST00000264883 LCTP09848 1927 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 FAM149AA5PLN7 773 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 ACKR2O00590 384 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 AURKAO14965 403 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 PARNO95453 639 aaKnown RBP13.21□□□□□ -0.29
NUP54-201ENST00000264883 KRT19P08727 400 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 TFEBP19484 476 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 SERPINB1P30740 379 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 SDC4P31431 198 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 CAPGP40121 348 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 RAP1GAPP47736 663 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 MPP1Q00013 466 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 SMAD1Q15797 465 aaKnown RBP13.21□□□□□ -0.29
NUP54-201ENST00000264883 TBCELQ5QJ74 424 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 UGT3A1Q6NUS8 523 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 FAM183BPQ6ZVS7 135 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 SLC22A16Q86VW1 577 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 DHRSXQ8N5I4 330 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 ISL2Q96A47 359 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 NOL6Q9H6R4 1146 aaKnown RBP13.21□□□□□ -0.29
NUP54-201ENST00000264883 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
NUP54-201ENST00000264883 SPAG4Q9NPE6 437 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 TBC1D14Q9P2M4 693 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 AURKCQ9UQB9 309 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 TLL2Q9Y6L7 1015 aa13.21□□□□□ -0.29
NUP54-201ENST00000264883 M0QX08 132 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 PIGNO95427 931 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 METTL18O95568 372 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 ITGBL1O95965 494 aaPredicted RBP13.21□□□□□ -0.3
NUP54-201ENST00000264883 LTFP02788 710 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 HSPA1AP0DMV8 641 aaKnown RBP13.21□□□□□ -0.3
NUP54-201ENST00000264883 HSPA1BP0DMV9 641 aaKnown RBP13.21□□□□□ -0.3
NUP54-201ENST00000264883 CCR10P46092 362 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 STAT5BP51692 787 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 NSUN2Q08J23 767 aaKnown RBP eCLIP13.21□□□□□ -0.3
NUP54-201ENST00000264883 INCA1Q0VD86 236 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 TRIM32Q13049 653 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 STX5Q13190 355 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 ATP6AP1Q15904 470 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 DPYSL2Q16555 572 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 CCDC14Q49A88 953 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 GRTP1Q5TC63 336 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.3
NUP54-201ENST00000264883 GTF2IRD2BQ6EKJ0 949 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 GTF2IRD2Q86UP8 949 aa13.21□□□□□ -0.3
NUP54-201ENST00000264883 GALNT13Q8IUC8 556 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms