RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 AIF1LQ9BQI0 150 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 RNF121Q9H920 327 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 PGRMC2O15173 223 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 FKBP6O75344 327 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 OR7A10O76100 309 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 BMPR2Q13873 1038 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 PPP2R2DQ66LE6 453 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 DUS1LQ6P1R4 473 aaKnown RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 FSTL5Q8N475 847 aaPredicted RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 PSMA8Q8TAA3 256 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 OMA1Q96E52 524 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 ZSWIM1Q9BR11 485 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 TMEM121Q9BTD3 319 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 TAPBPLQ9BX59 468 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 IMP3Q9NV31 184 aaKnown RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 KLQ9UEF7 1012 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 DMTF1Q9Y222 760 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CAPGP40121 348 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 CPA2P48052 419 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 EPC2Q52LR7 807 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 PHTF1Q9UMS5 762 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 DNAJC16Q9Y2G8 782 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 ZNF638Q14966 1978 aaKnown RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 ATG13O75143 517 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 AQP5P55064 265 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 SLC24A2Q9UI40 661 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 C1orf232A0A0U1RR37 186 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 PPP3R1P63098 170 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 MAP1SQ66K74 1059 aaPredicted RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 RAP1GAP2Q684P5 730 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 ZNF717Q9BY31 904 aaPredicted RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP13-201ENST00000263966 THAP1Q9NVV9 213 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 SETD6Q8TBK2 473 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 AP2M1Q96CW1 435 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 TSPAN18Q96SJ8 248 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 SMNDC1O75940 238 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP13-201ENST00000263966 RARGP13631 454 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 GP5P40197 560 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 KCNJ1P48048 391 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 SPIRE1Q08AE8 756 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 C17orf64Q86WR6 236 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 SRFBP1Q8NEF9 429 aaKnown RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 TRPS1Q9UHF7 1281 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 MED14O60244 1454 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 NEDD8-MDP1E9PL57 170 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 ERCC1P07992 297 aaPredicted RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 SGCBQ16585 318 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 TRMT5Q32P41 509 aaKnown RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 PSRC1Q6PGN9 363 aaPredicted RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 DNAJC14Q6Y2X3 702 aaPredicted RBP16.6■□□□□ 0.25
USP13-201ENST00000263966 GALNT13Q8IUC8 556 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 ETNPPLQ8TBG4 499 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 COX4I2Q96KJ9 171 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 RASGRP3Q8IV61 690 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 IFT52Q9Y366 437 aa16.6■□□□□ 0.25
USP13-201ENST00000263966 GRIN2DO15399 1336 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 HYKKA2RU49 373 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 PLIN3O60664 434 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 RNASEH2AO75792 299 aaKnown RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 HOXB6P17509 224 aaKnown RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 PON1P27169 355 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 CCKBRP32239 447 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 MYL6P60660 151 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 TOP3AQ13472 1001 aaPredicted RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 Q4G0T1 1027 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 H0YGN5 161 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 RAD51CO43502 376 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 PAEPP09466 180 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 ITIH4Q14624 930 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 MINDY4Q4G0A6 757 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 ATP5A1P25705 553 aaKnown RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 BDH1Q02338 343 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 PPIDQ08752 370 aaKnown RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 AAK1Q2M2I8 961 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 STXBP5Q5T5C0 1151 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 ADAMTSL2Q86TH1 951 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 CCDC36Q8IYA8 594 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 CATSPER2Q96P56 530 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 CFIP05156 583 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 C4orf19Q8IY42 314 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 ATP6V1C2Q8NEY4 427 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 TMEM125Q96AQ2 219 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 HIPK3Q9H422 1215 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 KCTD5Q9NXV2 234 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 USP42Q9H9J4 1324 aaKnown RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 EIF4BP23588 611 aaKnown RBP16.59■□□□□ 0.25
USP13-201ENST00000263966 UBXN2BQ14CS0 331 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 PFKFB4Q16877 469 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 SLC2A14Q8TDB8 520 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
USP13-201ENST00000263966 LOC100506127A0A0U1RQW1 187 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms