RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RDH11Q8TC12 318 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 ISL2Q96A47 359 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TSR3Q9UJK0 312 aaKnown RBP12.49□□□□□ -0.41
CHMP3-201ENST00000263856 FBXW11Q9UKB1 542 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
CHMP3-201ENST00000263856 A8MT66 165 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 FZD9O00144 591 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 XPOTO43592 962 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 AFF1P51825 1210 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 CBLBQ13191 982 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 LPIN1Q14693 890 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 TAPT1Q6NXT6 567 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 PIM3Q86V86 326 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 CBR4Q8N4T8 237 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 HNRNPABQ99729 332 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 OLFM1Q99784 485 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 SMOQ99835 787 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 CRTAC1Q9NQ79 661 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 EBF1Q9UH73 591 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 BTRCQ9Y297 605 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 TTC3P53804 2025 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 LRRC14BA6NHZ5 514 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 GIPC1O14908 333 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 H6PDO95479 791 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 PLIN5Q00G26 463 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 VPS26BQ4G0F5 336 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 GPR158Q5T848 1215 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 ZNF772Q68DY9 489 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 NEPROQ6NW34 567 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 PIWIL4Q7Z3Z4 852 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 TFAP2DQ7Z6R9 452 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 FAM35AQ86V20 835 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 LPPQ93052 612 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
CHMP3-201ENST00000263856 UNC93B1Q9H1C4 597 aa12.48□□□□□ -0.41
CHMP3-201ENST00000263856 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 DNAJC25-GNG10A0A024R161 153 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 A0A0G2JLL6 359 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 PPP6CO00743 305 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 NRP2O60462 931 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 SIX3O95343 332 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 BDNFP23560 247 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 ESRRGP62508 458 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 SCIMPQ6UWF3 145 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 PRRT2Q7Z6L0 340 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 LINC00523Q86TU6 105 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 TICAM1Q8IUC6 712 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 GAB3Q8WWW8 586 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 MRPL57Q9BQC6 102 aaKnown RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 RRN3Q9NYV6 651 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 ERI2A8K979 691 aaKnown RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 NCAM2O15394 837 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 HTRA2O43464 458 aaPredicted RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 CRCPO75575 148 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 ATP6V1B2P21281 511 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 ENTPD1P49961 510 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 RHDQ02161 417 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 GALNT2Q10471 571 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 MAPRE2Q15555 327 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 KCTD21Q4G0X4 260 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 HMBOX1Q6NT76 420 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 CHSY3Q70JA7 882 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 GPR141Q7Z602 305 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 CHERPQ8IWX8 916 aaKnown RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 HMGCLL1Q8TB92 370 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 SLCO4A1Q96BD0 722 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 KLHL5Q96PQ7 755 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 EPB41L1Q9H4G0 881 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
CHMP3-201ENST00000263856 IPPQ9Y573 584 aa12.47□□□□□ -0.41
CHMP3-201ENST00000263856 MTSS1O43312 755 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 PIRTP0C851 137 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 PIM1P11309 404 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 MTHFD1P11586 935 aaKnown RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 NCK1P16333 377 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 SMPD1P17405 629 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 PAMP19021 973 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 RPL26P61254 145 aaKnown RBP12.46□□□□□ -0.41
CHMP3-201ENST00000263856 APOFQ13790 326 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 SQLEQ14534 574 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 NEDD8Q15843 81 aa12.46□□□□□ -0.41
CHMP3-201ENST00000263856 ANKRD49Q8WVL7 239 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms