RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 BCAT1P54687 386 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC12A2P55011 1212 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 CDH17Q12864 832 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 FAM187BQ17R55 369 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 LCN8Q6JVE9 175 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 ZNF773Q6PK81 442 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 METTL7BQ6UX53 244 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 CDR2LQ86X02 465 aaPredicted RBP12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 FAM131BQ86XD5 332 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC41A1Q8IVJ1 513 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 TRPV3Q8NET8 790 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 CASP10Q92851 521 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 NXNL1Q96CM4 212 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 HSFY1Q96LI6 401 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 TRMOQ9BU70 441 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 KIFC1Q9BW19 673 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 GPN2Q9H9Y4 310 aaPredicted RBP12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 PSME2Q9UL46 239 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 TCAF1Q9Y4C2 921 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 TMEM233B4DJY2 109 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 EEF2KO00418 725 aaKnown RBP12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 ATP6V1B2P21281 511 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 SULT1E1P49888 294 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 CCT8P50990 548 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 TKTL1P51854 596 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 RPS3AP61247 264 aaKnown RBP12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 POU5F1BQ06416 359 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 ITGADQ13349 1161 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 ZNF846Q147U1 533 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 SOWAHAQ2M3V2 549 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 INTS6LQ5JSJ4 861 aaKnown RBP12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 LAYNQ6UX15 382 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 PLPPR4Q7Z2D5 763 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 SFRP1Q8N474 314 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 OR13F1Q8NGS4 319 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 HMGCLL1Q8TB92 370 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 MYRFLQ96LU7 910 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 GPR78Q96P69 363 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 H0YAE9 185 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 KCNK1O00180 336 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 GABBR2O75899 941 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 ALOX5P09917 674 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 RPL10P27635 214 aaKnown RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 AVPR1AP37288 418 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 RPL34P49207 117 aaKnown RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 OCA2Q04671 838 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 FAM83EQ2M2I3 478 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 EPHX4Q8IUS5 362 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC22A9Q8IVM8 553 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 CNTN4Q8IWV2 1026 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 MINDY1Q8N5J2 469 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC15A4Q8N697 577 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 CHST13Q8NET6 341 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 SEZ6LQ9BYH1 1024 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 ABCD2Q9UBJ2 740 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 C1orf232A0A0U1RR37 186 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 AHSGP02765 367 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 UMPSP11172 480 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 MBL2P11226 248 aaPredicted RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 LCP1P13796 627 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 FUT4P22083 530 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 GNL1P36915 607 aaPredicted RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 RPS9P46781 194 aaKnown RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 FOXM1Q08050 763 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 TSTD2Q5T7W7 516 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 BROXQ5VW32 411 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC15A3Q8IY34 581 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 TBC1D21Q8IYX1 336 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 TTC30BQ8N4P2 665 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 TXNDC5Q8NBS9 432 aaKnown RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 EFHD2Q96C19 240 aaPredicted RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 SNX27Q96L92 541 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 ZNF347Q96SE7 839 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 YIPF2Q9BWQ6 316 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 ZFYVE28Q9HCC9 887 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 INTS10Q9NVR2 710 aaKnown RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 AFG3L2Q9Y4W6 797 aa12.47□□□□□ -0.41
CHMP2B-201ENST00000263780 FAM95CA0A1B0GW59 222 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 DCLK1O15075 740 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 ZNF182P17025 639 aaPredicted RBP12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 ZNF24P17028 368 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 CD247P20963 164 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 NMBRP28336 390 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 AIF1P55008 147 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 NEDD8Q15843 81 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 PCID2Q5JVF3 399 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 AGAP9Q5VTM2 703 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 GALNT18Q6P9A2 607 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 LINC00299Q6ZSB3 139 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 CUZD1Q86UP6 607 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 DDIASQ8IXT1 998 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 OMDQ99983 421 aa12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 MTG1Q9BT17 334 aaPredicted RBP12.46□□□□□ -0.41
CHMP2B-201ENST00000263780 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms