RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CPA3P15088 417 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 HOXD9P28356 352 aaPredicted RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 SLC1A6P48664 564 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 CYP4F8P98187 520 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 DSG1Q02413 1049 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 IL10RBQ08334 325 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 EML3Q32P44 896 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 LRRC23Q53EV4 343 aaPredicted RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 NAPRTQ6XQN6 538 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 CLNKQ7Z7G1 428 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 TEX9Q8N6V9 391 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 TASP1Q9H6P5 420 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 ARL8BQ9NVJ2 186 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 CHCHD3Q9NX63 227 aaKnown RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 COPG2Q9UBF2 871 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 H3BNC9 293 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 TEX28O15482 410 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 RAG1P15918 1043 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 GNAZP19086 355 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 CPA2P48052 419 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 MRPS35P82673 323 aaKnown RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 PARP15Q460N3 678 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 FSCBQ5H9T9 825 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 VWA5B1Q5TIE3 1220 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 NEPROQ6NW34 567 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 POTEHQ6S545 545 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 TMEM150AQ86TG1 271 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 CRLF3Q8IUI8 442 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 SH3RF2Q8TEC5 729 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 HDAC10Q969S8 669 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 PPP1R36Q96LQ0 422 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 OMDQ99983 421 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 NMUR2Q9GZQ4 415 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 TREX1Q9NSU2 369 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 PLK2Q9NYY3 685 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 SPG21Q9NZD8 308 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 RUVBL2Q9Y230 463 aaKnown RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 FAM95CA0A1B0GW59 222 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 TTC36A6NLP5 189 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 TIMM44O43615 452 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 UNC5CO95185 931 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 RNF219Q5W0B1 726 aaPredicted RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 ASRGL1Q7L266 308 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 LRRC49Q8IUZ0 686 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 TEX26Q8N6G2 289 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 GBP7Q8N8V2 638 aaPredicted RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 ZNF689Q96CS4 500 aaPredicted RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 IFT43Q96FT9 208 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 SMG9Q9H0W8 520 aaKnown RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 RHOJQ9H4E5 214 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 TMEM165Q9HC07 324 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 ATP13A1Q9HD20 1204 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 MARCH4Q9P2E8 410 aaPredicted RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 TLK1Q9UKI8 766 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 FBXO5Q9UKT4 447 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 SNNO75324 88 aaPredicted RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 RHOCP08134 193 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 ATXN1LP0C7T5 689 aaKnown RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 RALBP11234 206 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 CCNG1P51959 295 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 ALDH18A1P54886 795 aaKnown RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 TAS2R39P59534 338 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 KLC1Q07866 573 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 TMCO4Q5TGY1 634 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 CARNMT1Q8N4J0 409 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 OR13J1Q8NGT2 312 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 PDCD6IPQ8WUM4 868 aaKnown RBP13.68□□□□□ -0.22
VMP1-201ENST00000262291 RILPQ96NA2 401 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 GPR22Q99680 433 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 NMRAL1Q9HBL8 299 aa13.68□□□□□ -0.22
VMP1-201ENST00000262291 FCHO1O14526 889 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 KLF11O14901 512 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 BIRC5O15392 142 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 SLC35E2BP0CK96 405 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 ATP6V1C1P21283 382 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 MZF1P28698 734 aaPredicted RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 MAGEA12P43365 314 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 MAPKAPK2P49137 400 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 CSE1LP55060 971 aaKnown RBP13.67□□□□□ -0.22
VMP1-201ENST00000262291 OXCT1P55809 520 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 DLG1Q12959 904 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 TSTD2Q5T7W7 516 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 TRIM42Q8IWZ5 723 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 OR13C4Q8NGS5 318 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 TTC8Q8TAM2 541 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 NXNL1Q96CM4 212 aa13.67□□□□□ -0.22
VMP1-201ENST00000262291 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms