RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 THG1LQ9NWX6 298 aaKnown RBP20.04■□□□□ 0.8
HOXC13-201ENST00000243056 TMEM9Q9P0T7 183 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 CLDN25C9JDP6 229 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 GSRP00390 522 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 C1QAP02745 245 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 ARRB2P32121 409 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 ETFBP38117 255 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 RPL10AP62906 217 aaKnown RBP20.04■□□□□ 0.8
HOXC13-201ENST00000243056 PHC1P78364 1004 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 CUL2Q13617 745 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 ZNF846Q147U1 533 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 NEDD8Q15843 81 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 ZNF699Q32M78 642 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 FASTKD1Q53R41 847 aaKnown RBP20.04■□□□□ 0.8
HOXC13-201ENST00000243056 UBE2UQ5VVX9 321 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 MFSD7Q6UXD7 560 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 SLC26A11Q86WA9 606 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 MCOLN2Q8IZK6 566 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 PPM1NQ8N819 430 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 ZUFSPQ96AP4 578 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 RMND5AQ9H871 391 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 DPP3Q9NY33 737 aa20.04■□□□□ 0.8
HOXC13-201ENST00000243056 ZNF839A8K0R7 811 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 CXorf49A8MYA2 514 aaPredicted RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 NOL3O60936 208 aaKnown RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 FGF3P11487 239 aaPredicted RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 ENPP1P22413 925 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 RFC1P35251 1148 aaPredicted RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 MNX1P50219 401 aaPredicted RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 TNK2Q07912 1038 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 FSCBQ5H9T9 825 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 TRAF7Q6Q0C0 670 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 TMC5Q6UXY8 1006 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 KCTD8Q6ZWB6 473 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 AKAP14Q86UN6 197 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 SORT1Q99523 831 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 CDH23Q9H251 3354 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 AURKAO14965 403 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 TMCC2O75069 709 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 IL18RAPO95256 599 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 SNRPAP09012 282 aaKnown RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 MYL4P12829 197 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 DDX5P17844 614 aaKnown RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 GRSF1Q12849 480 aaKnown RBP eCLIP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 PCSK7Q16549 785 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 C16orf89Q6UX73 402 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 SNX32Q86XE0 403 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 CTAGE3PQ8IX95 158 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 SLITRK1Q96PX8 696 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 ADAM2Q99965 735 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 ZBED2Q9BTP6 218 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 NOL6Q9H6R4 1146 aaKnown RBP20.03■□□□□ 0.8
HOXC13-201ENST00000243056 POLE4Q9NR33 117 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 FAM105AQ9NUU6 356 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 MIOSQ9NXC5 875 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 PCDHB4Q9Y5E5 795 aa20.03■□□□□ 0.8
HOXC13-201ENST00000243056 FRMPD3Q5JV73 1810 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 SMIM28A0A1B0GU29 152 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 TCN1P20061 433 aaPredicted RBP20.02■□□□□ 0.8
HOXC13-201ENST00000243056 ACO1P21399 889 aaKnown RBP20.02■□□□□ 0.8
HOXC13-201ENST00000243056 SERPINB5P36952 375 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 P2RX3P56373 397 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 UTS2BQ765I0 119 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 PCGF5Q86SE9 256 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 TNIP2Q8NFZ5 429 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 GAD1Q99259 594 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 SDCBP2Q9H190 292 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 AVENQ9NQS1 362 aaPredicted RBP20.02■□□□□ 0.8
HOXC13-201ENST00000243056 HMGXB4Q9UGU5 601 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 XPO7Q9UIA9 1087 aaKnown RBP20.02■□□□□ 0.8
HOXC13-201ENST00000243056 SCN1AP35498 2009 aa20.02■□□□□ 0.8
HOXC13-201ENST00000243056 ALX3O95076 343 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 ITGAVP06756 1048 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 CKMT2P17540 419 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 MAPRE1Q15691 268 aaKnown RBP20.02■□□□□ 0.79
HOXC13-201ENST00000243056 CDONQ4KMG0 1287 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 HMBOX1Q6NT76 420 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 ALKAL1Q6UXT8 129 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 DCP2Q8IU60 420 aaKnown RBP20.02■□□□□ 0.79
HOXC13-201ENST00000243056 PDIK1LQ8N165 341 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 KYQ8NBH2 561 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 TET1Q8NFU7 2136 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 CPA5Q8WXQ8 436 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 SCLYQ96I15 445 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 CSF3RQ99062 836 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 ASB7Q9H672 318 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 VRTNQ9H8Y1 702 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 NEK6Q9HC98 313 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 SMOXQ9NWM0 555 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 TXNDC16Q9P2K2 825 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 VPS28Q9UK41 221 aa20.02■□□□□ 0.79
HOXC13-201ENST00000243056 TBKBP1A7MCY6 615 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 CCRL2O00421 344 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 SOCS2O14508 198 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 HCRTO43612 131 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 DDHD2O94830 711 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 TSHRP16473 764 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 ME2P23368 584 aa20.01■□□□□ 0.79
HOXC13-201ENST00000243056 ARL1P40616 181 aaPredicted RBP20.01■□□□□ 0.79
HOXC13-201ENST00000243056 GCNT1Q02742 428 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms