RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 SERPINB5P36952 375 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 ARL4AP40617 200 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 FSTL4Q6MZW2 842 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 PLD6Q8N2A8 252 aaKnown RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 CDRT15Q96T59 188 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 OSBPL11Q9BXB4 747 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 VN1R3Q9BXE9 311 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 ZNHIT2Q9UHR6 403 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 RPS6KL1Q9Y6S9 549 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 A0A096LPK6 155 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 CARNS1A5YM72 827 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 H3BNC9 293 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 GRID2O43424 1007 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 TRMUO75648 421 aaKnown RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 CDK9P50750 372 aaKnown RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 LSM12Q3MHD2 195 aaKnown RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 TIGD5Q53EQ6 642 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 PPP1R26Q5T8A7 1209 aaPredicted RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 FUT10Q6P4F1 479 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 TAS1R1Q7RTX1 841 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 CROCCP3Q8IVE0 287 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 TMEM151AQ8N4L1 468 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNX3-201ENST00000230085 HIPK4Q8NE63 616 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 SPPL3Q8TCT6 385 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 HM13Q8TCT9 377 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 ASB9Q96DX5 294 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 P2RY11Q96G91 374 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 SHCBP1LQ9BZQ2 653 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 CASS4Q9NQ75 786 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 TBCCD1Q9NVR7 557 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 IPO11Q9UI26 975 aaKnown RBP20.74■□□□□ 0.91
SNX3-201ENST00000230085 FZD10Q9ULW2 581 aa20.74■□□□□ 0.91
SNX3-201ENST00000230085 TSC2P49815 1807 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 ZCWPW2A0A1B0GU75 182 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 TRIM38O00635 465 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 AIM2O14862 343 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 GRM6O15303 877 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 CSPG5O95196 566 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 MAP3K6O95382 1288 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 AP2A1O95782 977 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 SLC5A2P31639 672 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 ACADSBP45954 432 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 RAB15P59190 212 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 MRPS22P82650 360 aaKnown RBP20.73■□□□□ 0.91
SNX3-201ENST00000230085 TRAP1Q12931 704 aaKnown RBP20.73■□□□□ 0.91
SNX3-201ENST00000230085 GPM6BQ13491 265 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 CARM1Q86X55 608 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 KLHDC8BQ8IXV7 354 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 PKP2Q99959 881 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 C1QTNF1Q9BXJ1 281 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 OXCT2Q9BYC2 517 aaPredicted RBP20.73■□□□□ 0.91
SNX3-201ENST00000230085 WDR41Q9HAD4 459 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 MYO7AQ13402 2215 aa20.73■□□□□ 0.91
SNX3-201ENST00000230085 AP3B1O00203 1094 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 ZMPSTE24O75844 475 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 EFEMP2O95967 443 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 C2P06681 752 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 TAF6P49848 677 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 SESN2P58004 480 aaPredicted RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 PEX6Q13608 980 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 GRIN2CQ14957 1233 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 ZNF697Q5TEC3 545 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 DDX53Q86TM3 631 aaKnown RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 LRRC52Q8N7C0 313 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 POF1BQ8WVV4 589 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 B3GALT6Q96L58 329 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 GPR22Q99680 433 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 GRIP2Q9C0E4 1043 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 BRD8Q9H0E9 1235 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 TUBA8Q9NY65 449 aaPredicted RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 EPS15L1Q9UBC2 864 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 MYO18AQ92614 2054 aaKnown RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 TMEM265A0A087WTH1 108 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 A0A0J9YVX5 310 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 TARM1B6A8C7 271 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 ERVK-10P10266 1014 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 PSMC3P17980 439 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 TFEBP19484 476 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 RGS7P49802 495 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 MS4A2Q01362 244 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 CAMK1Q14012 370 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 KCTD11Q693B1 232 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 STRA8Q7Z7C7 330 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 CMC1Q7Z7K0 106 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 BHLHE22Q8NFJ8 381 aaPredicted RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 STYXQ8WUJ0 223 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 HSFY1Q96LI6 401 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 FCRL3Q96P31 734 aaPredicted RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 PRPF18Q99633 342 aaKnown RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 MAN1C1Q9NR34 630 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 DNAAF2Q9NVR5 837 aaKnown RBP20.72■□□□□ 0.91
SNX3-201ENST00000230085 ZNF358Q9NW07 568 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 CDYLQ9Y232 598 aa20.72■□□□□ 0.91
SNX3-201ENST00000230085 PIK3R2O00459 728 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 MFSD11O43934 449 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 PNPLA4P41247 253 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 NPY2RP49146 381 aa20.71■□□□□ 0.91
SNX3-201ENST00000230085 CRADDP78560 199 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms