RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 AGKQ53H12 422 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 RAP1GAP2Q684P5 730 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PQLC1Q8N2U9 271 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 OR9I1Q8NGQ6 314 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 RDH11Q8TC12 318 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 LRGUKQ96M69 825 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 SERPINI1Q99574 410 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PKMYT1Q99640 499 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 ZCWPW1Q9H0M4 648 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 ZBTB26Q9HCK0 441 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 FBRSL1Q9HCM7 1045 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 TREX1Q9NSU2 369 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 GMIPQ9P107 970 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 GIMAP2Q9UG22 337 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 GABRQQ9UN88 632 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 FNDC3AQ9Y2H6 1198 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 LRRC14BA6NHZ5 514 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PPP6CO00743 305 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 TNFRSF10BO14763 440 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 TRPA1O75762 1119 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 SUPT7LO94864 414 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 ASGR1P07306 291 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PRSS56P0CW18 603 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PRDX6P30041 224 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 NSUN2Q08J23 767 aaKnown RBP eCLIP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 TUSC3Q13454 348 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 LPIN1Q14693 890 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PITRM1Q5JRX3 1037 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 MARC1Q5VT66 337 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 SERINC5Q86VE9 423 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 BLOC1S5Q8TDH9 187 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 MRPL57Q9BQC6 102 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 EFCAB1Q9HAE3 211 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 IL1RL2Q9HB29 575 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 SP110Q9HB58 689 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 GMPR2Q9P2T1 348 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PTGDR2Q9Y5Y4 395 aa14.73□□□□□ -0.05
CNOT3-201ENST00000221232 PDCD11Q14690 1871 aaKnown RBP14.73□□□□□ -0.05
CNOT3-201ENST00000221232 A0A0U1RQF3 1178 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 TCAF2A6NFQ2 919 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 AP3B1O00203 1094 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 DNAJA2O60884 412 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 GPC4O75487 556 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SERPINH1P50454 418 aaKnown RBP14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CSRP3P50461 194 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CDKN2DP55273 166 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 PRAMEP78395 509 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SULT2A1Q06520 285 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 PDK3Q15120 406 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 GSTA3Q16772 222 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 FAM83EQ2M2I3 478 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 BRMS1LQ5PSV4 323 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SLC30A9Q6PML9 568 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 TMEM207Q6UWW9 146 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SLC45A3Q96JT2 553 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SLC39A3Q9BRY0 314 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SMOC2Q9H3U7 446 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 UXTQ9UBK9 157 aaPredicted RBP14.72□□□□□ -0.05
CNOT3-201ENST00000221232 A8MT66 165 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CSPG5O95196 566 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 ATP5F1P24539 256 aaPredicted RBP14.72□□□□□ -0.05
CNOT3-201ENST00000221232 SOX11P35716 441 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
CNOT3-201ENST00000221232 EIF4EBP2Q13542 120 aaPredicted RBP14.72□□□□□ -0.05
CNOT3-201ENST00000221232 KCNA10Q16322 511 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 PIGGQ5H8A4 983 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 ARTNQ5T4W7 220 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 HECTD2Q5U5R9 776 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CYP2R1Q6VVX0 501 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CFAP52Q8N1V2 620 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 IGSF8Q969P0 613 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 IFT43Q96FT9 208 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 DCUN1D1Q96GG9 259 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CNBD2Q96M20 576 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 TBATAQ96M53 351 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 KLHL32Q96NJ5 620 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 PKP2Q99959 881 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.72□□□□□ -0.05
CNOT3-201ENST00000221232 VTI1BQ9UEU0 232 aa14.72□□□□□ -0.05
CNOT3-201ENST00000221232 FGF10O15520 208 aaPredicted RBP14.71□□□□□ -0.05
CNOT3-201ENST00000221232 TBX4P57082 545 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 GALNT3Q14435 633 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 TLR1Q15399 786 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 GEN1Q17RS7 908 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 MANEALQ5VSG8 457 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 MRPL10Q7Z7H8 261 aaKnown RBP14.71□□□□□ -0.05
CNOT3-201ENST00000221232 CUZD1Q86UP6 607 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 CNTN4Q8IWV2 1026 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 LILRA2Q8N149 483 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 CEP70Q8NHQ1 597 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 MYEOVQ96EZ4 313 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 SPATS2LQ9NUQ6 558 aaKnown RBP14.71□□□□□ -0.05
CNOT3-201ENST00000221232 PDP2Q9P2J9 529 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 ARL5AQ9Y689 179 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 OR6B1O95007 311 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 FGFR3P22607 806 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 ME2P23368 584 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 ACVRL1P37023 503 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 GRIA2P42262 883 aa14.71□□□□□ -0.05
CNOT3-201ENST00000221232 TIGD7Q6NT04 549 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms