RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ZBTB6Q15916 424 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 HMBOX1Q6NT76 420 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 KLHL35Q6PF15 583 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CARM1Q86X55 608 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 HMGCLL1Q8TB92 370 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 EDEM1Q92611 657 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 PBXIP1Q96AQ6 731 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 TEKT5Q96M29 485 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 OSMRQ99650 979 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 MCMBPQ9BTE3 642 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 DNAI2Q9GZS0 605 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 ELP3Q9H9T3 547 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SPAG4Q9NPE6 437 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 TRHDEQ9UKU6 1024 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 UBQLN1Q9UMX0 589 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CSADQ9Y600 493 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 FOXD2O60548 495 aaPredicted RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SRP72O76094 671 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 NPR3P17342 541 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 KCNA5P22460 613 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 LRPAP1P30533 357 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 RPL34P49207 117 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 DMPKQ09013 629 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 LRP8Q14114 963 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 MAPRE2Q15555 327 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 UGP2Q16851 508 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 ZNF470Q6ECI4 717 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 RWDD4Q6NW29 188 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC27A1Q6PCB7 646 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CANT1Q8WVQ1 401 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 GPR78Q96P69 363 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 MRPL40Q9NQ50 206 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SFMBT1Q9UHJ3 866 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CROTQ9UKG9 612 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SHROOM3Q8TF72 1996 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CROCCQ5TZA2 2017 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 FAM149AA5PLN7 773 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 H3BRB1 525 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SOCS2O14508 198 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 NCAM2O15394 837 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 NPHS1O60500 1241 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CAPNS1P04632 268 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SNRPB2P08579 225 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 UGT1A6P19224 532 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 ATP5F1P24539 256 aaPredicted RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 YWHAQP27348 245 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC7A1P30825 629 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 TAF6P49848 677 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 GSTM4Q03013 218 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 FRG1Q14331 258 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 SQLEQ14534 574 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 GRIK4Q16099 956 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 PKN3Q6P5Z2 889 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 CHSY3Q70JA7 882 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 PIWIL4Q7Z3Z4 852 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 DHFR2Q86XF0 187 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 FIBCD1Q8N539 461 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 RNF34Q969K3 372 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 FICDQ9BVA6 458 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 KIFC1Q9BW19 673 aa10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 UPF3AQ9H1J1 476 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 TUT1Q9H6E5 874 aaKnown RBP10.6□□□□□ -0.71
CX3CL1-201ENST00000006053 AURKAO14965 403 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 PMPCBO75439 489 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC25A27O95847 323 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 FYNP06241 537 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 USP17L7P0C7H9 530 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 COL6A2P12110 1019 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 SOX11P35716 441 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC1A2P43004 574 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ALDH3B2P48448 385 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ENTPD1P49961 510 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 PRKCQQ04759 706 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 C16orf72Q14CZ0 275 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 PCID2Q5JVF3 399 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 C6orf183Q5T699 404 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 CLEC6AQ6EIG7 209 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ARHGAP36Q6ZRI8 547 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 CLEC20AQ6ZU45 233 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ARMCX2Q7L311 632 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 GPR141Q7Z602 305 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 CUZD1Q86UP6 607 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 PELI3Q8N2H9 469 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 AFAP1L2Q8N4X5 818 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 RIN3Q8TB24 985 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 NT5C3BQ969T7 300 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 HDAC11Q96DB2 347 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 MAELQ96JY0 434 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ZNF560Q96MR9 790 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 MRPL57Q9BQC6 102 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 SIK2Q9H0K1 926 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 CLK4Q9HAZ1 481 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 WDR6Q9NNW5 1121 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 OR12D3Q9UGF7 316 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 EBF1Q9UH73 591 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 DERAQ9Y315 318 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms