RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Nos2P29477 1144 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Nudt1P53368 156 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Klra4Q60651 263 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Inpp4bQ6P1Y8 924 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gsdmc3Q8CB12 480 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 PolbQ8K409 335 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Asz1Q8VD46 475 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gm28961A0A087WPA5 222 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gm21858A0A087WQ24 222 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Slc27a6E9Q9W4 619 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Nfkb1P25799 971 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Sat1P48026 171 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 SqleP52019 572 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rpl26P61255 145 aaKnown RBP13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 CenplQ3U3S3 329 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Cops7bQ8BV13 264 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Epm2aip1Q8VEH5 606 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Pcdha2Q91Y17 948 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ccdc77Q9CZH8 489 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Cndp2Q9D1A2 475 aaKnown RBP13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ephx1Q9D379 455 aa13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 PrccQ9EQC8 491 aaKnown RBP13.94□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Kctd14A0A0U1RNG7 287 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rad21l1A2AU37 552 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Clca3bE9PUL3 1044 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gm3239L7N2D9 227 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Timm13P62075 95 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Plcl1Q3USB7 1096 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 G2e3Q5RJY2 716 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Samd4aQ8CBY1 711 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Guca1bQ8VBV8 201 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Stard13Q923Q2 1113 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Xrn2Q9DBR1 951 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Tnrc6cQ3UHC0 1690 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 FocadA2AKG8 1798 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Myh6Q02566 1938 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rrm2P11157 390 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rps6ka3P18654 740 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ifrd1P19182 449 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Tap1P21958 724 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 IgfalsP70389 603 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Lrrc47Q505F5 581 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Q5XFZ0 217 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rmnd5aQ80YQ8 391 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Snx16Q8C080 344 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Pphln1Q8K2H1 381 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 IlkapQ8R0F6 392 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Plbd1Q8VCI0 550 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Kiaa2013Q91X21 634 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Q99KU6 348 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 TheglQ9DA15 459 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Lima1Q9ERG0 753 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 NumbQ9QZS3 653 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Mical3Q8CJ19 1993 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Myh15E9Q264 1925 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Cyp2t4E9PWV0 503 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 F6Y6L6 278 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Vti1bO88384 232 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 DmpkP54265 631 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gpatch4Q3TFK5 415 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Nek10Q3UGM2 1111 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Phactr4Q501J7 694 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Eps15l1Q60902 907 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rasa4Q6PFQ7 802 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Mfn1Q811U4 741 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 TufmQ8BFR5 452 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Pgs1Q8BHF7 553 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Q9CPS8 106 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Sh3glb1Q9JK48 365 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 EmcnQ9R0H2 261 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Krt83E9Q1Y9 479 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Srsf11E9Q6E5 511 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gm6408J3QNG1 320 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Defa8P50706 81 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Slc26a1P58735 704 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ugt3a1Q3UP75 523 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 1700001K19RikQ80ZT1 219 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Mrps35Q8BJZ4 320 aaKnown RBP13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 RorbQ8R1B8 470 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Acsf2Q8VCW8 615 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 VasnQ9CZT5 673 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Rnft1Q9DCN7 395 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gmeb1Q9JL60 562 aa13.93□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ank1Q02357 1862 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Kif13bA0A286YCV9 1847 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Zfp882E9Q4R4 555 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Fzd1O70421 642 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Lmo2P25801 158 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Kctd19Q562E2 927 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ctc1Q5SUQ9 1212 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Tecpr1Q80VP0 1166 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Arel1Q8CHG5 823 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ces2aQ8QZR3 558 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Necab2Q91ZP9 389 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Ddx28Q9CWT6 540 aaKnown RBP13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Mrps33Q9D2R8 106 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Padi3Q9Z184 664 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Deaf1Q9Z1T5 566 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Gm13941A2AJ38 245 aa13.92□□□□□ -0.18
Pcdha1-202ENSMUST00000193839 Slc4a11A2AJN7 862 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms