RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Vmn2r14E9Q759 848 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 LipiF6YQT7 476 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Zfp846G3X996 541 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Vmn2r10K7N621 847 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Gm3159K7N760 267 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Sult3a1O35403 293 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 TyrobpO54885 114 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 P01807 119 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Psma2P49722 234 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fmo3P97501 534 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Pecam1Q08481 727 aaKnown RBP13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 B3gntl1Q3U129 357 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Gcnt3Q5JCT0 437 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Sim2Q61079 657 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fzd4Q61088 537 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 FntaQ61239 377 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Tbc1d31Q6NXY1 996 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fbxo22Q78JE5 402 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mettl20Q80ZM3 255 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fam72aQ8BFZ8 149 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 B3galnt2Q8BG28 504 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mterf2Q8BKY8 385 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Tarsl2Q8BLY2 790 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Camk1dQ8BW96 385 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Phactr3Q8BYK5 558 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Cadm4Q8R464 388 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Med17Q8VCD5 649 aaKnown RBP13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Imp4Q8VHZ7 291 aaKnown RBP13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 PlvapQ91VC4 438 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 CoprsQ9CQ13 173 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fam83dQ9D7I8 585 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mrpl17Q9D8P4 176 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Rrp8Q9DB85 457 aaKnown RBP13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Slc23a2Q9EPR4 648 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Cpb2Q9JHH6 422 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Plscr3Q9JIZ9 296 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Ptk2bQ9QVP9 1009 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Dnase2bQ9QY48 354 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 CalcrlQ9R1W5 463 aa13.95□□□□□ -0.18
Ercc1-203ENSMUST00000160369 D3Ertd254eA0A0G2JEM5 796 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Ajap1A2ALI5 412 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Cxcr3O88410 367 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Igkv7-33P01632 114 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Ap1g1P22892 822 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Akr1b8P45377 316 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Rpl26P61255 145 aaKnown RBP13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mc1rQ01727 315 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Znf746Q3U133 652 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mylk3Q3UIZ8 795 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mindy4Q3UQI9 744 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Gpr149Q3UVY1 732 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Sema3gQ4LFA9 780 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 PtprrQ62132 656 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Sema4aQ62178 760 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Six1Q62231 284 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Q810S2 196 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Xylt1Q811B1 953 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Pnpla2Q8BJ56 486 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 PigtQ8BXQ2 582 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Dus1lQ8C2P3 475 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Ephb1Q8CBF3 984 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fam228aQ8CDW1 299 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Txndc11Q8K2W3 948 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Nup85Q8R480 656 aaKnown RBP13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Med25Q8VCB2 745 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Decr1Q9CQ62 335 aaKnown RBP13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Rnf135Q9CWS1 417 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Tdrd12Q9CWU0 1215 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Nsmce1Q9D720 266 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Tmco5aQ9D9D5 303 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Glipr1l1Q9DAG6 236 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Q9DAR0 182 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fundc1Q9DB70 155 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Tlr9Q9EQU3 1032 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Elf2Q9JHC9 593 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Actn2Q9JI91 894 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Sgk2Q9QZS5 367 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mzf1S4R1L6 814 aa13.94□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Ttc30a2A2AKQ8 664 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Mgat4eA6H684 439 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Zfp174B9EJW5 407 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Vmn2r39L7N2E5 861 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Fpr-rs3O88537 343 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 F3P20352 294 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Ap1m1P35585 423 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 GemP55041 295 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 1700061G19RikQ08EE8 705 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 FaxcQ3UMF9 409 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Prdm6Q3UZD5 596 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Cep112Q5PR68 954 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 E2f5Q61502 335 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Trim25Q61510 634 aaKnown RBP13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Lingo3Q6GQU6 589 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Inpp4bQ6P1Y8 924 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Parp6Q6P6P7 630 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Tubb2aQ7TMM9 445 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Pja2Q80U04 707 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Rpp38Q80UU2 280 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Zbtb41Q811F1 908 aa13.93□□□□□ -0.18
Ercc1-203ENSMUST00000160369 Nipal4Q8BZF2 406 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms