RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Syce1lQ5D525 247 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Vmn1r191Q8K4D0 298 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Vmn1r79Q8R285 306 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pth2rQ91V95 546 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rmnd5bQ91YQ7 393 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Batf3Q9D275 118 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Slamf8Q9D3G2 278 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Clvs1Q9D4C9 354 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Racgap1Q9WVM1 628 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pex11bQ9Z210 259 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 NrapQ80XB4 1728 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Olfr1049A2ARZ0 308 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 SmoktcrA2KF29 484 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Skint6A7XUZ6 1240 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cntnap3E9PY62 1287 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 F830016B08RikG3UWE2 416 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Vmn2r5K7N788 911 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cyp27b1O35084 507 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 CrymO54983 313 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Prox1P48437 737 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Hspa4lP48722 838 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gucy2eP52785 1108 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 TankP70347 448 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 SelpQ01102 768 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 ItkQ03526 625 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Snx21Q3UR97 363 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ccdc85aQ5SP85 500 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Icam5Q60625 917 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 MogQ61885 246 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Sema3cQ62181 751 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Olfr295Q7TS08 309 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 HomezQ80W88 542 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 TiparpQ8C1B2 657 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Guca1bQ8VBV8 201 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pcdha11Q91Y19 950 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rad51cQ924H5 366 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Smim11aQ99J19 55 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Fuca1Q99LJ1 452 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 St7Q99M96 577 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Zfp655Q9CZP3 541 aaKnown RBP11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Q9D979 236 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 PyglQ9ET01 850 aa11.66□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Vmn2r74E9PW21 853 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Adamts14E9PX39 1209 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Gm2832F7AEC7 200 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Man1a1P45700 655 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ctps2P70303 586 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mc1rQ01727 315 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Asprv1Q09PK2 339 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Nat9Q3UG98 241 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mief2Q5NCS9 454 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Zfp658Q5PPQ4 887 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Caprin1Q60865 707 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Sox17Q61473 419 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Fam120bQ6RI63 786 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Arhgap26Q6ZQ82 814 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 RubcnQ80U62 956 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Pcdh20Q8BIZ0 952 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ticam2Q8BJQ4 232 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Stx16Q8BVI5 326 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Snx17Q8BVL3 470 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 TpbglQ8C013 384 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Zswim3Q8CFL8 695 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mbtps2Q8CHX6 515 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Erich5Q8K0S2 362 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Slc5a9Q8VDT1 685 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Snx9Q91VH2 595 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Atpaf2Q91YY4 289 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Dach2Q925Q8 634 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Dctn2Q99KJ8 402 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 PclafQ9CQX4 110 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Wdr89Q9D0R9 386 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Zfp384E9Q1A5 584 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cyp2w1E9Q816 493 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Socs2O35717 198 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 NadkP58058 439 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rpl26P61255 145 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 OxtrP97926 388 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ebf1Q07802 591 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rab26Q504M8 260 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Tex24Q5DP50 351 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cpa4Q6P8K8 420 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cyp2d40Q6P8N9 338 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rslcan18Q7M6X5 460 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Dnajc16Q80TN4 772 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Cxcr1Q810W6 351 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Mtrf1lQ8BJU9 373 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Frs2Q8C180 508 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Tada2aQ8CHV6 443 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Stx5Q8K1E0 355 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Ddx18Q8K363 660 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Rbmx2Q8R0F5 326 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 MiosQ8VE19 875 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Hnrnpa0Q9CX86 305 aaKnown RBP11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Syvn1Q9DBY1 612 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Adam17Q9Z0F8 827 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 Il18rapQ9Z2B1 614 aa11.65□□□□□ -0.54
Col9a1-202ENSMUST00000088349 IsxA1A546 240 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Olfr1023A2ASU6 311 aa11.64□□□□□ -0.55
Col9a1-202ENSMUST00000088349 Usp51B1AY15 661 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms