RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Ptk7Q8BKG3 1062 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Itpk1Q8BYN3 419 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Slco6c1Q8C0X7 706 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Tceal5Q8CCT4 200 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Tfb1mQ8JZM0 345 aaKnown RBP12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Pitrm1Q8K411 1036 aaKnown RBP12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Vmn1r213Q8R278 384 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Nup85Q8R480 656 aaKnown RBP12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Rev1Q920Q2 1249 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Trim7Q923T7 510 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 KlbQ99N32 1043 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Arl8bQ9CQW2 186 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 HemgnQ9ERZ0 503 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Trip4Q9QXN3 581 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 Mzf1S4R1L6 814 aa12.52□□□□□ -0.4
Lig3-202ENSMUST00000080461 RlfA2A7F4 1918 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Igkv10-94A0A075B5L1 115 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Pcna-ps2A0A140T8V5 261 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 DldO08749 509 aaKnown RBP12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Snx3O70492 162 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Yme1l1O88967 715 aaKnown RBP12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 JundP15066 341 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 PcnaP17918 261 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Casp2P29594 452 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Eml1Q05BC3 814 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Snx21Q3UR97 363 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Bdkrb1Q61125 334 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Tead4Q62296 427 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 MregQ6NVG5 214 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Paqr6Q6TCG5 343 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Olfr213Q7TS32 327 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 TdrkhQ80VL1 560 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Pcid2Q8BFV2 399 aaKnown RBP12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Wasf2Q8BH43 497 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Smad3Q8BUN5 425 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 C5ar2Q8BW93 344 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Arhgap25Q8BYW1 648 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Dclre1bQ8C7W7 541 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Tbc1d14Q8CGA2 694 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Gfm2Q8R2Q4 779 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Cadm1Q8R5M8 456 aaKnown RBP12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Nt5c1bQ91YE9 573 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Trpc7Q9WVC5 862 aa12.52□□□□□ -0.41
Lig3-202ENSMUST00000080461 Sdc4O35988 198 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Psmc3O88685 442 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 UmpsP13439 481 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Tcf3P15806 651 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Ripply1Q2WG77 201 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Arhgap45Q3TBD2 1116 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Gpatch4Q3TFK5 415 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Zfp217Q3U0X6 1041 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Agap2Q3UHD9 1186 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Olfml2bQ3V1G4 746 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Capn3Q64691 821 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Dclk2Q6PGN3 756 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Olfr299Q7TS05 330 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Ppp1r15bQ8BFW3 697 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Slc41a1Q8BJA2 512 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Suds3Q8BR65 328 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Aldh4a1Q8CHT0 562 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Acap1Q8K2H4 740 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Pde6cQ91ZQ1 861 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Grk2Q99MK8 689 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Cldn19Q9ET38 224 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 HephQ9Z0Z4 1157 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Net1Q9Z206 595 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 KcpQ3U492 1550 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Gm21964A0A1W2P7S4 437 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Gm3259D3YUK0 475 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Akap5D3YVF0 745 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Trim55G3X8Y1 545 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 PargO88622 969 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Adam15O88839 864 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Colec11Q3SXB8 272 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Dnajc8Q6NZB0 253 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Tigd3Q7TM95 470 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Rps6kc1Q8BLK9 1056 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Sit1Q8C503 180 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Pcyox1lQ8C7K6 495 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Podxl2Q8CAE9 603 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Znf668Q8K2R5 619 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Dlg2Q91XM9 852 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Dnajc3Q91YW3 504 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Atad3Q925I1 591 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Ddx50Q99MJ9 734 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 CinpQ9D0V8 212 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 S100pbpQ9D5K4 396 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Nup210Q9QY81 1886 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Gm4450E9Q007 373 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Pdzd7E9Q9W7 1021 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Vmn1r176G3UW31 304 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Ap3d1O54774 1199 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 E2f6O54917 272 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 P01810 119 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 ChgbP16014 677 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 UtyP79457 1212 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Ctnnb1Q02248 781 aaKnown RBP12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Abcd2Q61285 741 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Hsd3b4Q61767 373 aa12.51□□□□□ -0.41
Lig3-202ENSMUST00000080461 Stx3Q64704 289 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms